CF417814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417814 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.127e-29 Identity = 72/158 (45.57%), Postives = 95/158 (60.13%), Query Frame = -1 Query: 190 ERSQEYVSSSTTTKQLLDEYQRRLKIDLXSSQYEKMQKNLKNLKEVNINLKKEIRQRLGEXXXXXXXXXXXXLEQDVDNCLRIIRERKLRAISGQIVTPXXXXXXXXXXXXXXRNGFIINAKEEDXPYELVDNEGHYDSVIRFQNGGPGIFXXRLXPN 663 ++ EY+S +T TKQL D+YQ+ + +DL SS YEKMQ++LK L EVN NL++EIRQR+GE L +D+DN L++IRERK + IS QI T F +A+ ED + LVDNEG Y+SV+ F NGGP I RL N Sbjct: 52 QKLHEYISPTTATKQLFDQYQKAVGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNLVLEF--DARREDPHFGLVDNEGDYNSVLGFPNGGPRIIALRLPTN 207
BLAST of CF417814 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.601e-27 Identity = 72/165 (43.64%), Postives = 95/165 (57.58%), Query Frame = -1 Query: 157 EYVSSSTTTKQLLDEYQRRLKIDLXSSQYEKMQKNLKNLKEVNINLKKEIRQRLGEXXXXXXXXXXXXLEQDVDNCLRIIRERKLRAISGQIVTPXXXXXXXXXXXXXXRNGFIINAKEEDXPYELVDNEGHYDSVIRFQNGGPGIFXXRLXPNEXLSSQXXSIH 651 E++S S TTKQL D YQ+ + +DL +S YEKMQ+ L+ LKEVN NL+KEIRQR+GE L ++VDN L++IRERK + I QI T F +A++ED PY LV+ EG Y+SV+ F NGG I RL PN + +H Sbjct: 56 EFISPSITTKQLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNLLLEF--DARQED-PYGLVEQEGDYNSVLGFPNGGHRILALRLQPNHHQPNHHHHLH 217
BLAST of CF417814 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19 Identity = 54/154 (35.06%), Postives = 83/154 (53.90%), Query Frame = -1 Query: 190 EYVSSSTTTKQLLDEYQRRLKIDLXSSQYEKMQKNLKNLKEVNINLKKEIRQRLGEXXXXXXXXXXXXLEQDVDNCLRIIRERKLRAISGQIVTPXXXXXXXXXXXXXXRNGFIINAKEEDXPYELVDNEGHYDSVIRFQNGGPGIFXXRLXPN 651 EY+S +TTTK+++D YQ +D+ ++QYE+MQ+ + L E N NL+ +I+QRLGE LE +++N +++RERK +++ QI T + + A ED Y LVDN G YDSV+ +Q G + R N Sbjct: 56 EYISPNTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRA--EDPHYGLVDNGGDYDSVLGYQIEGSRAYALRFHQN 207
BLAST of CF417814 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = -1 Query: 370 EYVSSSTTTKQLLDEYQRRLKIDLXSSQYEKMQKNLKNLKEVNINLKKEIRQRLGEXXXXXXXXXXXXLEQDVDNCLRIIRERKLRAISGQIVT 651 E+ S ST K + D YQ+ + L QYE MQ+ L +LK++N NL+ EIRQR+GE LEQ+VD L+ +R RK I+ Q T Sbjct: 56 EFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTET 149 The following BLAST results are available for this feature:
BLAST of CF417814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417814 ID=CF417814; Name=CF417814; organism=Citrus sinensis; type=EST; length=663bpback to top |