CF417839

Overview
NameCF417839
Unique NameCF417839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 5.803e-69
Identity = 131/159 (82.39%), Postives = 139/159 (87.42%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXXGPPKET 478
            ECQSHRLTVEDPVTVE ITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTG PSLYQTDPSGTFSAWKANATGRNSNS+REFLE N+KETSGQET+KLAIRALLEVVESGGKNIEVAVMT+E GL+QL+EAEIDA+V                PPK+T
Sbjct:   91 ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKENGLRQLEEAEIDAIVAEIEAEKAAAEAAKKAPPKDT 249          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 3.761e-68
Identity = 128/138 (92.75%), Postives = 134/138 (97.10%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415
            ECQSHRLTVEDPVTVE ITRYIAGLQQKYTQSGGVRPFGLSTLI+GFDP+TGVPSLYQTDPSGTFSAWKANATGRNSNS REFLE NYKETSGQET+KLAIRALLEVVESGGKNIEVAVMT+E GLKQL+EAEIDA+V
Sbjct:   91 ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKEHGLKQLEEAEIDAIV 228          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 8.379e-68
Identity = 132/160 (82.50%), Postives = 141/160 (88.12%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREK-GLKQLDEAEIDAMVXXXXXXXXXXXXXXXGPPKET 478
            ECQSHRLT+EDPVTVE ITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPY+ +PSLYQTDPSGTFSAWKANATGRNSNS+REFLE NYKE+SGQETIKLAIRALLEVVESGGKNIEVAVMTRE+ GL+QL+EAEIDA+V               GPPKET
Sbjct:   91 ECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLEVVESGGKNIEVAVMTREETGLRQLEEAEIDAIVAKIEAEKAAAEAAKKGPPKET 250          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.005e-66
Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXXGPPKET 478
            ECQSHRLTVED VTVE ITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLE NYKETSG+ETIKLAIRALLEVVESGGKNIE+AVMT++ GL+QL+EAEID  V               G PKET
Sbjct:   91 ECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.005e-66
Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXXGPPKET 478
            ECQSHRLTVED VTVE ITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLE NYKETSG+ETIKLAIRALLEVVESGGKNIE+AVMT++ GL+QL+EAEID  V               G PKET
Sbjct:   91 ECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.005e-66
Identity = 127/159 (79.87%), Postives = 135/159 (84.91%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXXGPPKET 478
            ECQSHRLTVEDPVTVE ITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLE NYK+TSG+ETIKLAIRALLEVVESGGKNIE+AVMT + GL++L+EAEID  V               G PKET
Sbjct:   91 ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 6.005e-66
Identity = 127/159 (79.87%), Postives = 135/159 (84.91%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMVXXXXXXXXXXXXXXXGPPKET 478
            ECQSHRLTVEDPVTVE ITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT  P+LYQTDPSGTFSAWKANATGRNSNSMREFLE NYK+TSG+ETIKLAIRALLEVVESGGKNIE+AVMT + GL++L+EAEID  V               G PKET
Sbjct:   91 ECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLAIRALLEVVESGGKNIEIAVMTHKDGLRELEEAEIDEYVAEIEAEKAAAEAAKKGAPKET 249          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.005e-66
Identity = 128/160 (80.00%), Postives = 138/160 (86.25%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQETIKLAIRALLEVVESGGKNIEVAVMTREKG-LKQLDEAEIDAMVXXXXXXXXXXXXXXXGPPKET 478
            ECQSHRLT+EDPVTVE ITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT +P+LYQTDPSGTFSAWKANATGRNSNS+REFLE NYKE++GQET+KLAIRALLEVVESGGKNIEVAVMTRE+G LKQL+E EID +V               GP KET
Sbjct:   91 ECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQETVKLAIRALLEVVESGGKNIEVAVMTREEGVLKQLEEEEIDIIVAEIEAEKAAAEAAKKGPAKET 250          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.538e-45
Identity = 94/141 (66.67%), Postives = 113/141 (80.14%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKE---TSGQETIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415
            ECQSHRLTVEDPVTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR++ ++REFLE NY +    S  + IKLAI+ALLEVV+SGGKNIE+AV+ R + LK L+  EI+ +V
Sbjct:   92 ECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQSGGKNIELAVIRRNQPLKILESKEIETLV 231          
BLAST of CF417839 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.008e-45
Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = 2
Query:    2 ECQSHRLTVEDPVTVEDITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEXNYKETSGQE---TIKLAIRALLEVVESGGKNIEVAVMTREKGLKQLDEAEIDAMV 415
            ECQSHRLTVEDPVTVE ITRYIA L+Q+YTQS G RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+REFLE NY + + +    TIKL I+ALLEVV+SGGKNIE+AVM R++ LK L+  EI+  V
Sbjct:   90 ECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYV 229          
The following BLAST results are available for this feature:
BLAST of CF417839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
PSA7_CICAR5.803e-6982.39Proteasome subunit alpha type-7 OS=Cicer arietinum... [more]
PSA7_SOLLC3.761e-6892.75Proteasome subunit alpha type-7 OS=Solanum lycoper... [more]
PSA7B_ARATH8.379e-6882.50Proteasome subunit alpha type-7-B OS=Arabidopsis t... [more]
PSA7B_ORYSJ6.005e-6680.50Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7B_ORYSI6.005e-6680.50Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7A_ORYSJ6.005e-6679.87Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7A_ORYSI6.005e-6679.87Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA7A_ARATH6.005e-6680.00Proteasome subunit alpha type-7-A OS=Arabidopsis t... [more]
PSA7_CARAU1.538e-4566.67Proteasome subunit alpha type-7 OS=Carassius aurat... [more]
PSA7_HUMAN2.008e-4567.38Proteasome subunit alpha type-7 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-769 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417839 ID=CF417839; Name=CF417839; organism=Citrus sinensis; type=EST; length=644bp
AGAATGTCAGAGCCACAGGCTGACTGTTGAGGACCCAGTAACTGTTGAGG
ACATCACTCGTTACATTGCAGGTCTCCAGCAGAAGTACACACAAAGCGGT
GGTGTGAGACCATTTGGTCTTTCTACTCTGATTGTGGGCTTTGATCCATA
CACTGGCGTGCCATCACTATATCAGACAGATCCTTCTGGGACATTTTCTG
CTTGGAAAGCTAATGCAACTGGGAGAAACTCTAATTCAATGAGGGAGTTT
CTGGAGNAAAACTATAAGGAAACTTCCGGGCAAGAAACTATAAAGCTTGC
AATTCGGGCATTACTTGAGGTTGTTGAGAGTGGGGGCAAAAACATAGAAG
TTGCTGTGATGACAAGGGAGAAGGGTCTGAAGCAGCTTGATGAAGCTGAA
ATTGATGCCATGGTAGCCGAGATTGAAGCAAAGAAGGCCGCCGCTGAGGC
TGCAAAGAAGGGACCTCCCAAGGAAACATGAGTTTTTAGTTCTGGCTTCT
GTTTTTTCCATTGCCTGTTGTTTTTCACCTTTCAGAATTTTAGTATGCTT
TTTTTNGTGGNTAAGTTTTATATGCTTTTAGATTTGCATTCNAAAGATAT
ACCAGAGCCACCAGATTATTGCCAGCTTAAATTTTCTTATATGG
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