CF417842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIFH_TRISP (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.365e-20 Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP ++TN+K V S LS ++ V NI+ KP +YV + + +SFGG+ PAA+G L+SIGG+ P N+ SA + L KKL +PK+R +I F + G + GWNG+TF Sbjct: 1 MPIFTLNTNIKATDVP-SDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHFVNLNGDDVGWNGTTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIFH_TRITR (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.278e-18 Identity = 44/115 (38.26%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP STNV + L + +A ++GKPE+YV + + G ++FGGT+ PA +G+L+S+GG+ + N+ SA + L L +P +R +I F D +GS+ G+NGSTF Sbjct: 1 MPIFTFSTNVPSENISVD-FLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGFGQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVDMRGSDVGYNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIFH_BRUMA (Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=BMBAC01P19.1 PE=3 SV=4) HSP 1 Score: 90.8929 bits (224), Expect = 4.856e-18 Identity = 47/115 (40.87%), Postives = 71/115 (61.74%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP I TN+ + + +S+ L +A++ VA +GKPE+YV I + G M FGG+EDP A L SIG + P VN + + +L +L +PK+R +I+F D + S+ +NGSTF Sbjct: 1 MPYFTIDTNIPQNSI-SSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEASSMAFNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIF_XENLA (Macrophage migration inhibitory factor OS=Xenopus laevis GN=mif PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.480e-16 Identity = 46/115 (40.00%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP I TNV V ++LS+ T +A GKP Y+ I + MSFG + DP A L SIG + NK + + IL K+L++P +R +I +YD +N GWNGSTF Sbjct: 1 MPVFTIRTNVCRDSVP-DTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIFH_WUCBA (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti GN=MIF PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 7.752e-16 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP I TN + +S+ L +A + V +GKPE+YV I + G PM FGG+EDP L SIG + P VN + + +L +L +PK+R +I+ D + S+ +NGSTF Sbjct: 1 MPYFTIDTNKPQDSI-SSAFLKKAPNVVPKALGKPESYVSIHVNGGQPMVFGGSEDPCPVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEASSMAFNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIF_XENTR (Macrophage migration inhibitory factor OS=Xenopus tropicalis GN=mif PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.563e-15 Identity = 43/115 (37.39%), Postives = 62/115 (53.91%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP + TNV + ++LS+ T +A GKP Y+ I + MSFG + DP A L SIG + NK S + L K++++P +R +I F+D +N GWNGSTF Sbjct: 1 MPTFTVCTNVCRDSMP-DTLLSDLTKLLAKATGKPAEYIAIHIMPDQMMSFGDSTDPCAVCSLSSIGKIGGPQNKSYSKLLCDYLTKQMNIPANRVYINFHDLNPANVGWNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIF_CHICK (Macrophage migration inhibitory factor OS=Gallus gallus GN=MIF PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 8.571e-15 Identity = 44/115 (38.26%), Postives = 59/115 (51.30%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP I TNV V S+L E T +A GKP Y+ + + MSFGG+ DP A L SIG + NK + + ++ K L V R +I ++D +N GWNGSTF Sbjct: 1 MPMFTIHTNVCKDAVP-DSLLGELTQQLAKATGKPAQYIAVHIVPDQMMSFGGSTDPCALCSLYSIGKIGGQQNKTYTKLLCDMIAKHLHVSADRVYINYFDINAANVGWNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIF_RAT (Macrophage migration inhibitory factor OS=Rattus norvegicus GN=Mif PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 1.909e-14 Identity = 42/115 (36.52%), Postives = 58/115 (50.43%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A L SIG + N+ S + +L +L + R +I +YD +N GWNGSTF Sbjct: 1 MPMFIVNTNVPRASVP-EGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTSDPCALCSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIF_MOUSE (Macrophage migration inhibitory factor OS=Mus musculus GN=Mif PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.909e-14 Identity = 42/115 (36.52%), Postives = 58/115 (50.43%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP ++TNV V LSE T +A GKP Y+ + + M+F GT DP A L SIG + N+ S + +L +L + R +I +YD +N GWNGSTF Sbjct: 1 MPMFIVNTNVPRASVP-EGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALCSLHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTF 114
BLAST of CF417842 vs. ExPASy Swiss-Prot
Match: MIF_PIG (Macrophage migration inhibitory factor OS=Sus scrofa GN=MIF PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 3.257e-14 Identity = 40/115 (34.78%), Postives = 60/115 (52.17%), Query Frame = 3 Query: 15 MPCLXISTNVKLHGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGSTF 359 MP ++TNV V LSE T + +GKP Y+ + + M+FGG+ +P A L SIG + N+ S + +L ++L + R +I +YD +N GWNGSTF Sbjct: 1 MPMFVVNTNVPRASVP-DGFLSELTQQLVQAMGKPAQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRIYINYYDMNAANVGWNGSTF 114 The following BLAST results are available for this feature:
BLAST of CF417842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417842 ID=CF417842; Name=CF417842; organism=Citrus sinensis; type=EST; length=578bpback to top |