CF417845

Overview
NameCF417845
Unique NameCF417845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: ST38L_HUMAN (Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 2.537e-53
Identity = 76/136 (55.88%), Postives = 110/136 (80.88%), Query Frame = 1 
Query:    7 EQEEMLRNLE--RRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            ++E+ LR  +  R+ETE++RL+R ++G+DDFE L +IG+GAFGEVRL + K TG I+AMK L+KS+ML++ QV H+R+ER++L E D   +V++FYSFQD   LYLIME+LPGGD+MTLLM++D L+E+  +FYI+
Sbjct:   60 DEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKSDMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIS 195

HSP 2 Score: 68.9366 bits (167), Expect = 2.537e-53
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLGR*RHYKPGN 595
            E+VLAI +IHQ  ++HRDIKPDNL+LD  GH+KLSDFGLC  L+  + +       H  P +
Sbjct:  196 ETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSD 257
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: STK38_PONAB (Serine/threonine-protein kinase 38 OS=Pongo abelii GN=STK38 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.620e-53
Identity = 74/136 (54.41%), Postives = 111/136 (81.62%), Query Frame = 1 
Query:    4 EEQEEMLRNLE-RRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            +E++ + R+   R+ETE++RL+R ++G++DFE L +IG+GAFGEVRL + K TG ++AMK L+K++ML++ QV H+R+ER++L E DS  +V++FYSFQD   LYLIME+LPGGD+MTLLM++D L+E+  +FYIA
Sbjct:   59 DEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIA 194

HSP 2 Score: 70.4774 bits (171), Expect = 5.620e-53
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLGR*RHYKPGN 595
            E+VLAI SIHQ  ++HRDIKPDNL+LD  GH+KLSDFGLC  L+  + +       H  P +
Sbjct:  195 ETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSD 256
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: STK38_MOUSE (Serine/threonine-protein kinase 38 OS=Mus musculus GN=Stk38 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.620e-53
Identity = 74/136 (54.41%), Postives = 111/136 (81.62%), Query Frame = 1 
Query:    4 EEQEEMLRNLE-RRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            +E++ + R+   R+ETE++RL+R ++G++DFE L +IG+GAFGEVRL + K TG ++AMK L+K++ML++ QV H+R+ER++L E DS  +V++FYSFQD   LYLIME+LPGGD+MTLLM++D L+E+  +FYIA
Sbjct:   59 DEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIA 194

HSP 2 Score: 70.4774 bits (171), Expect = 5.620e-53
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLGR*RHYKPGN 595
            E+VLAI SIHQ  ++HRDIKPDNL+LD  GH+KLSDFGLC  L+  + +       H  P +
Sbjct:  195 ETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSD 256
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: STK38_HUMAN (Serine/threonine-protein kinase 38 OS=Homo sapiens GN=STK38 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.620e-53
Identity = 74/136 (54.41%), Postives = 111/136 (81.62%), Query Frame = 1 
Query:    4 EEQEEMLRNLE-RRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            +E++ + R+   R+ETE++RL+R ++G++DFE L +IG+GAFGEVRL + K TG ++AMK L+K++ML++ QV H+R+ER++L E DS  +V++FYSFQD   LYLIME+LPGGD+MTLLM++D L+E+  +FYIA
Sbjct:   59 DEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIA 194

HSP 2 Score: 70.4774 bits (171), Expect = 5.620e-53
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLGR*RHYKPGN 595
            E+VLAI SIHQ  ++HRDIKPDNL+LD  GH+KLSDFGLC  L+  + +       H  P +
Sbjct:  195 ETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSD 256
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: STK38_BOVIN (Serine/threonine-protein kinase 38 OS=Bos taurus GN=STK38 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 5.620e-53
Identity = 74/136 (54.41%), Postives = 111/136 (81.62%), Query Frame = 1 
Query:    4 EEQEEMLRNLE-RRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            +E++ + R+   R+ETE++RL+R ++G++DFE L +IG+GAFGEVRL + K TG ++AMK L+K++ML++ QV H+R+ER++L E DS  +V++FYSFQD   LYLIME+LPGGD+MTLLM++D L+E+  +FYIA
Sbjct:   59 DEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIA 194

HSP 2 Score: 70.4774 bits (171), Expect = 5.620e-53
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLGR*RHYKPGN 595
            E+VLAI SIHQ  ++HRDIKPDNL+LD  GH+KLSDFGLC  L+  + +       H  P +
Sbjct:  195 ETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSD 256
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.594e-52
Identity = 74/136 (54.41%), Postives = 109/136 (80.15%), Query Frame = 1 
Query:    7 EQEEMLRNLE--RRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            ++E+ LR  +  R+ETE++RL+R ++G+DDFE L +I +GAFGEVRL + K TG I+AMK L+K++ML++ QV H+R+ER++L E D   +V++FYSFQD   LYLIME+LPGGD+MTLLM++D L+E+  +FYI+
Sbjct:   60 DEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIARGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIS 195

HSP 2 Score: 68.5514 bits (166), Expect = 3.594e-52
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLGR*RHYKPGN 595
            E+VLAI +IHQ  ++HRD+KPDNL+LD  GH+KLSDFGLC  L+  + +       H  P +
Sbjct:  196 ETVLAIDAIHQLGFIHRDVKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSD 257
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: TRC_DROPS (Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.595e-52
Identity = 74/136 (54.41%), Postives = 112/136 (82.35%), Query Frame = 1 
Query:    1 NEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            ++ QE+ L++ ++ ETEY+RL+R ++G++DFE L +IG+GAFGEVRL + K TG ++AMK L+K++ML++ QV HVR+ER++L E D + +V+++YSFQD   LYLIME+LPGGD+MTLLM++D LSE+  +FYI+
Sbjct:   63 SQRQEKRLQHAQK-ETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQDQVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYIS 197

HSP 2 Score: 67.781 bits (164), Expect = 3.595e-52
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 550
            E+ LAI SIH+  ++HRDIKPDNL+LD  GHLKLSDFGLC  L+  +
Sbjct:  198 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSH 244
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: TRC_DROME (Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.108e-52
Identity = 74/135 (54.81%), Postives = 111/135 (82.22%), Query Frame = 1 
Query:    4 EEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            + QE+ L++ ++ ETEY+RL+R ++G++DFE L +IG+GAFGEVRL + K TG ++AMK L+K++ML++ QV HVR+ER++L E D + +V+++YSFQD   LYLIME+LPGGD+MTLLM++D LSE+  +FYI+
Sbjct:   65 QRQEKRLQHAQK-ETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTGHVYAMKVLRKADMLEKEQVAHVRAERDVLVEADHQWVVKMYYSFQDPVNLYLIMEFLPGGDMMTLLMKKDTLSEEGTQFYIS 198

HSP 2 Score: 67.781 bits (164), Expect = 6.108e-52
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 550
            E+ LAI SIH+  ++HRDIKPDNL+LD  GHLKLSDFGLC  L+  +
Sbjct:  199 ETALAIDSIHKLGFIHRDIKPDNLLLDARGHLKLSDFGLCTGLKKSH 245
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: NDRA_DICDI (Probable serine/threonine-protein kinase ndrA OS=Dictyostelium discoideum GN=ndrA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.627e-51
Identity = 71/136 (52.21%), Postives = 110/136 (80.88%), Query Frame = 1 
Query:    1 NEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            ++E  ++ + L+++E++YMR++R K+   DFE + +IG+GAFGEV L R + + +++AMK+LKKSEMLK+ Q  HVR+ER++LA  ++  +V+L+YSFQD ++LYLIMEYLPGGD+M+LL++ DI +E+ ARFYIA
Sbjct:   82 SKESNDLRKELDKKESDYMRIKRLKLKRSDFEVIRIIGRGAFGEVSLVRHRESNDLYAMKRLKKSEMLKKEQAAHVRAERDVLASANTNWVVKLYYSFQDDNYLYLIMEYLPGGDMMSLLIKYDIFTENQARFYIA 217

HSP 2 Score: 64.6994 bits (156), Expect = 6.627e-51
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSS 556
            E++LAI S+H   Y+HRDIKPDNL+LD  GH+KL D GLC      +SS
Sbjct:  218 ETILAIESVHTLGYIHRDIKPDNLLLDSKGHVKLCDLGLCTGFHRLHSS 266
[Close]
BLAST of CF417845 vs. ExPASy Swiss-Prot
Match: CBK1_PNECA (Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii GN=CBK1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.630e-51
Identity = 75/135 (55.56%), Postives = 107/135 (79.26%), Query Frame = 1 
Query:    4 EEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 408
            E ++  L +L ++E++++RL+R K+ ++DF  + +IGKGAFGEVRL +   TG+I+AMK L KSEM K+ Q+ HV++ER++LAE DS  +V L+YSFQDS +LYLIME+LPGGD+MT+L++ D  SEDV RFYIA
Sbjct:   97 ERKKRQLNSLGQKESQFLRLRRTKLSLNDFHTVKVIGKGAFGEVRLVQKIDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDSQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYIA 231

HSP 2 Score: 62.3882 bits (150), Expect = 6.630e-51
Identity = 24/39 (61.54%), Postives = 34/39 (87.18%), Query Frame = 2 
Query:  410 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGL 526
            E +LAI ++H+  ++HRDIKPDN+++DK GH+KLSDFGL
Sbjct:  232 ECILAIEAVHKLGFIHRDIKPDNILIDKTGHIKLSDFGL 270
The following BLAST results are available for this feature:
BLAST of CF417845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ST38L_HUMAN2.537e-5355.88Serine/threonine-protein kinase 38-like OS=Homo sa... [more]
STK38_PONAB5.620e-5354.41Serine/threonine-protein kinase 38 OS=Pongo abelii... [more]
STK38_MOUSE5.620e-5354.41Serine/threonine-protein kinase 38 OS=Mus musculus... [more]
STK38_HUMAN5.620e-5354.41Serine/threonine-protein kinase 38 OS=Homo sapiens... [more]
STK38_BOVIN5.620e-5354.41Serine/threonine-protein kinase 38 OS=Bos taurus G... [more]
ST38L_MOUSE3.594e-5254.41Serine/threonine-protein kinase 38-like OS=Mus mus... [more]
TRC_DROPS3.595e-5254.41Serine/threonine-protein kinase tricorner OS=Droso... [more]
TRC_DROME6.108e-5254.81Serine/threonine-protein kinase tricorner OS=Droso... [more]
NDRA_DICDI6.627e-5152.21Probable serine/threonine-protein kinase ndrA OS=D... [more]
CBK1_PNECA6.630e-5155.56Serine/threonine-protein kinase CBK1 OS=Pneumocyst... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-775 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-010_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417845 ID=CF417845; Name=CF417845; organism=Citrus sinensis; type=EST; length=627bp
AATGAGGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGA
ATATATGAGGCTGCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAAT
TAACTTTAATTGGAAAAGGTGCATTTGGTGAGGTCAGGTTATGTCGTGCT
AAAACTACTGGAGAGATCTTTGCCATGAAGAAATTGAAGAAATCGGAGAT
GCTTAAACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTTG
CAGAGGTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGAT
TCTGATTTCTTATATCTCATCATGGAGTATTTACCTGGTGGTGACATTAT
GACATTACTAATGAGAGAAGATATTCTTTCCGAGGATGTTGCACGTTTTT
ACATAGCCAGAAAGCGTTCTGGCTATTCATTCAATTCACCAACATAACTA
TGTTCATAGGGATATAAAACCAGATAACCTGATACTAGACAAAAATGGCC
ATTTGAAGCTTTCAGACTTTGGTTTGTGCAAGCCCCTAGAGGACAAATAT
TCATCAATTCTATTGGGAAGATGAAGACATTATAAACCAGGAAACTGTAA
GCGAAGCTGAAGGACAGTGGATGATGC
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