CF417853
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
BLAST of CF417853 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.701e-36 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3 Query: 93 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 320 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76 HSP 2 Score: 99.7525 bits (247), Expect = 6.484e-31 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 3 Query: 321 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 470 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50 HSP 3 Score: 55.4546 bits (132), Expect = 6.484e-31 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 472 EDGRTLADYNIQKESTLHLVLRLRGG 549 EDGRTLADYNIQKESTLHLVLRLRGG Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76 The following BLAST results are available for this feature:
BLAST of CF417853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417853 ID=CF417853; Name=CF417853; organism=Citrus sinensis; type=EST; length=659bpback to top |