CF417864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP5B_ARATH (Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 9.843e-43 Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLT 321 +HASLVGQAAPKHKGKISRSLAAKT LAIR DALGD QDN+MGLENRAKLEARLRNLEGK+L R +GS+KGKPK+EVY+KD+K G G +IT AKTYN AADS+ G T Sbjct: 341 FHASLVGQAAPKHKGKISRSLAAKTVLAIRVDALGDSQDNTMGLENRAKLEARLRNLEGKDLGRLSGSSKGKPKIEVYNKDKKMGSGGLITPAKTYNTAADSLLGET 447
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP5A_ARATH (Probable nucleolar protein 5-1 OS=Arabidopsis thaliana GN=NOP5-1 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 2.424e-41 Identity = 81/103 (78.64%), Postives = 93/103 (90.29%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSV 309 +HAS+VGQAAPK+KGKISRSLAAK+ LAIRCDALGD QDN+MG+ENR KLEARLR LEGK+L R +GSAKGKPK+EVYDKD+KKG G +IT AKTYN AADS+ Sbjct: 340 FHASVVGQAAPKNKGKISRSLAAKSVLAIRCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGRLSGSAKGKPKIEVYDKDKKKGSGGLITPAKTYNTAADSL 442
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_MACFA (Nucleolar protein 58 OS=Macaca fascicularis GN=NOP58 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.746e-23 Identity = 56/102 (54.90%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADS 306 YHASLVGQ +PKHKGKISR LAAKT LAIR DA G+D ++MG+ENRAKLEARLR LE + + + +G+ K K E Y+ + KTY+P+ DS Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHK---------SEVKTYDPSGDS 434
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_HUMAN (Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.746e-23 Identity = 56/102 (54.90%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADS 306 YHASLVGQ +PKHKGKISR LAAKT LAIR DA G+D ++MG+ENRAKLEARLR LE + + + +G+ K K E Y+ + KTY+P+ DS Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHK---------SEVKTYDPSGDS 434
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_MOUSE (Nucleolar protein 58 OS=Mus musculus GN=Nop58 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.280e-23 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADS 306 YHASLVGQ++PKHKGKISR LAAKT LAIR DA G+D ++MG+ENRAKLEARLR LE + + + +G+ K K E Y+ + KTY+P+ DS Sbjct: 342 YHASLVGQSSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGIENRAKLEARLRILEDRGIRKISGTGKALAKAEKYEHK---------SEVKTYDPSGDS 434
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_RAT (Nucleolar protein 58 OS=Rattus norvegicus GN=Nop58 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.633e-23 Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADS 306 YHASLVGQ +PKHKGKISR LAAKT LAIR DA G+D ++MG ENRAKLEARLR LE + + + +G+ K K E Y+ + KTY+P+ DS Sbjct: 342 YHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGAENRAKLEARLRILEDRGIRKISGTGKALAKAEKYEHK---------SEVKTYDPSGDS 434
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP5C_ARATH (Putative nucleolar protein 5-3 OS=Arabidopsis thaliana GN=NOP5-3 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 2.134e-21 Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNSMGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKK 252 YHA LV QAAP++KGKI+RSLAAK+ALAIRCDA G+ QDN+MG+E+R KLEARLRNLEG +L + + EV DKD KK Sbjct: 312 YHAPLVRQAAPENKGKIARSLAAKSALAIRCDAFGNGQDNTMGVESRLKLEARLRNLEGGDLGAC------EEEEEVNDKDTKK 389
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_CANAL (Nucleolar protein 58 OS=Candida albicans GN=NOP58 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.439e-17 Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADS 306 YHASLVGQA+ K+KG+I+R+LAAK A+++R D +++D S GLENRAK+E RL LEG+++ + + +PK+E+ + R A TAA P ADS Sbjct: 343 YHASLVGQASGKNKGRIARTLAAKAAVSLRYDCFDEERDESDDFGLENRAKVEGRLSQLEGRDMRTTSKVVREQPKVEITEA-RAYNADADSTAAAAAAPTADS 445
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_KLULA (Nucleolar protein 58 OS=Kluyveromyces lactis GN=NOP58 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 54/117 (46.15%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGNE 345 YHASLVGQA+ K+KGKI+R LAAK A+++R DAL +D+D+S +GLE+RAK+E+RL LEG++L + PK+ ++ KK IT A+ YN AD+V A +E Sbjct: 343 YHASLVGQASGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLESRAKVESRLSQLEGRDL-------RTTPKVV---REHKK---TEITEARAYNADADTVSSAAAPADSDDE 446
BLAST of CF417864 vs. ExPASy Swiss-Prot
Match: NOP58_YEAST (Nucleolar protein 58 OS=Saccharomyces cerevisiae GN=NOP58 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 1 YHASLVGQAAPKHKGKISRSLAAKTALAIRCDALGDDQDNS--MGLENRAKLEARLRNLEGKELSRAAGSAKGKPKLEVYDKDRKKGPGAMITAAKTYNPAADSVFGLTENAADGNE 345 YHASLVGQA K+KGKI+R LAAK A+++R DAL +D+D+S +GLE+RAK+E RL LEG++L + K+E +T A+ YN AD+ +++ +D ++ Sbjct: 343 YHASLVGQATGKNKGKIARVLAAKAAVSLRYDALAEDRDDSGDIGLESRAKVENRLSQLEGRDLRTTPKVVREAKKVE-------------MTEARAYNADADTAKAASDSESDSDD 446 The following BLAST results are available for this feature:
BLAST of CF417864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417864 ID=CF417864; Name=CF417864; organism=Citrus sinensis; type=EST; length=349bpback to top |