CF417878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_EUPES (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Euphorbia esula GN=CRD1 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.382e-60 Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 1 Query: 196 ARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 ++K NK I ETLLTPR YTTDFDEME LF TEINKKLN +EFEALLQEFKTDYNQTHF RN EFKEAADKMQGPLRQ Sbjct: 49 SKKGNKKEINETLLTPRFYTTDFDEMETLFNTEINKKLNQSEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQ 126 HSP 2 Score: 120.553 bits (301), Expect = 1.382e-60 Identity = 62/77 (80.52%), Postives = 65/77 (84.42%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 +IFVEFLERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS ++ GLSDF YALDLGFLTKARKYTF Sbjct: 126 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 202
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_ARATH (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Arabidopsis thaliana GN=CRD1 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.734e-58 Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 1 Query: 190 SQARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 S+++K K I E+LLTPR YTTDF+EME LF TEINK LN AEFEALLQEFKTDYNQTHF RN EFKEAADK+QGPLRQ Sbjct: 51 SKSKKGTKKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVRNKEFKEAADKLQGPLRQ 130 HSP 2 Score: 117.472 bits (293), Expect = 4.734e-58 Identity = 61/77 (79.22%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 +IFVEFLERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS ++ GLSDF ALDLGFLTKARKYTF Sbjct: 130 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTF 206
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_HORVU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.030e-57 Identity = 60/77 (77.92%), Postives = 65/77 (84.42%), Query Frame = 1 Query: 199 RKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 +K KT + E+LLTPR YTTDFDEME LF EINK+LN EF+ALLQEFKTDYNQTHF RN EFKEAADKMQGPLRQ Sbjct: 62 KKRGKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEAADKMQGPLRQ 138 HSP 2 Score: 117.472 bits (293), Expect = 3.030e-57 Identity = 61/77 (79.22%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 +IFVEFLERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS ++ GLSDF ALDLGFLTKARKYTF Sbjct: 138 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTF 214
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_GOSHI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum GN=CRD1 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 3.031e-57 Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 1 Query: 199 RKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 +K KTAI ETLLTPR YTTDFDEME LF TEINK LN +EFE+LLQEFKTDYNQTHF RN EFKEAADK+ GPLRQ Sbjct: 50 KKAAKTAIKETLLTPRFYTTDFDEMEALFNTEINKNLNQSEFESLLQEFKTDYNQTHFVRNKEFKEAADKIDGPLRQ 126 HSP 2 Score: 115.161 bits (287), Expect = 3.031e-57 Identity = 60/77 (77.92%), Postives = 63/77 (81.82%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 +IFVEF ERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS ++ GLSDF ALDLGFLTKARKYTF Sbjct: 126 QIFVEFSERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTF 202
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CTH1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2, chloroplastic OS=Chlamydomonas reinhardtii GN=CTH1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.774e-48 Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 +IF+EFLERSCTAEFSGFLLYKELGRRLK TNP VAEIF+LMS ++ +SDF ALDLGFLTK RKYTF Sbjct: 128 KIFIEFLERSCTAEFSGFLLYKELGRRLKATNPVVAEIFTLMSRDEARHAGFLNKAMSDFNLALDLGFLTKNRKYTF 204 HSP 2 Score: 103.605 bits (257), Expect = 3.774e-48 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 K A ETLLTPR YTTDFDEME LF E+NK ++ EFEA+L EFK DYNQ HF RN FKEAA+K+QGP R+ Sbjct: 56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFKLDYNQRHFVRNETFKEAAEKIQGPTRK 128
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=CRD1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.634e-41 Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 RIF+EFLERSCTAEFSGFLLYKEL RR+K ++P VAE+F LMS ++ LSDF ALDLGFLTK R YT+ Sbjct: 128 RIFIEFLERSCTAEFSGFLLYKELARRMKASSPEVAEMFLLMSRDEARHAGFLNKALSDFNLALDLGFLTKNRTYTY 204 HSP 2 Score: 89.7373 bits (221), Expect = 6.634e-41 Identity = 44/73 (60.27%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 K A ETLLTPR YTTDFDEME LF EIN L+ E A L EF+ DYN+ HF RN FK AADK+ G R+ Sbjct: 56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNLDMEELNACLNEFRNDYNKVHFVRNETFKAAADKVTGETRR 128
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_GRATL (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Gracilaria tenuistipitata var. liui GN=acsF PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.785e-36 Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 2 Query: 431 IFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 +FVEFLERSCTAEFSGFLLYKEL R+L K+NP +AE F LMS ++ +SDF +LDLGFLTK+RKYTF Sbjct: 77 LFVEFLERSCTAEFSGFLLYKELSRKLDKSNPVIAECFLLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTF 152 HSP 2 Score: 72.4034 bits (176), Expect = 5.785e-36 Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 190 SQARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEA 399 S ++ ++T + ETLLTPR YTTDFDEM L + N EFEALLQEF+ DYN+ HF R+ EF+++ Sbjct: 2 STSQNLSQTPVKETLLTPRFYTTDFDEMSKLDISS-----NIDEFEALLQEFRADYNRQHFIRDQEFEQS 66
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF1_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Synechocystis sp. (strain PCC 6803) GN=acsF1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 9.812e-36 Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 ++FVEFLERSCTAEFSGFLLYKELGRRLK NP +AE F+LMS ++ +SDF +LDLGFLTK+RKYTF Sbjct: 85 QLFVEFLERSCTAEFSGFLLYKELGRRLKNKNPLLAECFNLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTF 161 HSP 2 Score: 67.781 bits (164), Expect = 9.812e-36 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 193 QARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 + R KT ET+LTPR YTTDFDEM +++ N E A+L+EF+ DYN+ HF RN F ++ D + G RQ Sbjct: 12 EIRPGVKTPAKETILTPRFYTTDFDEM-----AKMDISPNEDELRAILEEFRVDYNRHHFVRNESFNKSWDHIDGEKRQ 85
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_TRIEI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Trichodesmium erythraeum (strain IMS101) GN=acsF PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.278e-35 Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 R+FVEFLERSCTAEFSGFLLYKELGRRLK +P +AE F+LMS ++ +SDF +LDLGFLTK+RKYTF Sbjct: 85 RLFVEFLERSCTAEFSGFLLYKELGRRLKNKSPILAECFTLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTF 161 HSP 2 Score: 67.781 bits (164), Expect = 1.278e-35 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 190 SQARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 ++ R K ET+LTPR YTTDFDEM +++ +N E A+L+EF+ DYN+ HF RN EF ++ D + G R+ Sbjct: 11 TEMRPGVKVPAKETILTPRFYTTDFDEM-----AKMDISVNEDELMAILEEFRADYNRHHFVRNEEFAQSWDHIDGETRR 85
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF3_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 3 OS=Anabaena sp. (strain PCC 7120) GN=acsF3 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.242e-35 Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 2 Query: 428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658 R+FVEFLERSCTAEFSGFLLYKELGRRLK +P +AE F+LMS ++ +SDF +LDLGFLTK+R YTF Sbjct: 85 RLFVEFLERSCTAEFSGFLLYKELGRRLKDKSPVLAECFNLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRNYTF 161 HSP 2 Score: 67.781 bits (164), Expect = 6.242e-35 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 193 QARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429 + R K ETLLTPR YTTDFDEM ++ +N E A+L+EF+TDYN+ HF R+ EF+++ D + G R+ Sbjct: 12 EIRPGVKVPAKETLLTPRFYTTDFDEM-----ARMDISVNEDELLAILEEFRTDYNRHHFVRDAEFEKSWDHIDGDTRR 85 The following BLAST results are available for this feature:
BLAST of CF417878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417878 ID=CF417878; Name=CF417878; organism=Citrus sinensis; type=EST; length=660bpback to top |