CF417878

Overview
NameCF417878
Unique NameCF417878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_EUPES (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Euphorbia esula GN=CRD1 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.382e-60
Identity = 65/78 (83.33%), Postives = 68/78 (87.18%), Query Frame = 1
Query:  196 ARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            ++K NK  I ETLLTPR YTTDFDEME LF TEINKKLN +EFEALLQEFKTDYNQTHF RN EFKEAADKMQGPLRQ
Sbjct:   49 SKKGNKKEINETLLTPRFYTTDFDEMETLFNTEINKKLNQSEFEALLQEFKTDYNQTHFVRNKEFKEAADKMQGPLRQ 126          

HSP 2 Score: 120.553 bits (301), Expect = 1.382e-60
Identity = 62/77 (80.52%), Postives = 65/77 (84.42%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +IFVEFLERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS   ++       GLSDF YALDLGFLTKARKYTF
Sbjct:  126 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTF 202          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_ARATH (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Arabidopsis thaliana GN=CRD1 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.734e-58
Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 1
Query:  190 SQARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            S+++K  K  I E+LLTPR YTTDF+EME LF TEINK LN AEFEALLQEFKTDYNQTHF RN EFKEAADK+QGPLRQ
Sbjct:   51 SKSKKGTKKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVRNKEFKEAADKLQGPLRQ 130          

HSP 2 Score: 117.472 bits (293), Expect = 4.734e-58
Identity = 61/77 (79.22%), Postives = 64/77 (83.12%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +IFVEFLERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS   ++       GLSDF  ALDLGFLTKARKYTF
Sbjct:  130 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTF 206          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_HORVU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.030e-57
Identity = 60/77 (77.92%), Postives = 65/77 (84.42%), Query Frame = 1
Query:  199 RKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            +K  KT + E+LLTPR YTTDFDEME LF  EINK+LN  EF+ALLQEFKTDYNQTHF RN EFKEAADKMQGPLRQ
Sbjct:   62 KKRGKTEVNESLLTPRFYTTDFDEMEQLFNAEINKQLNQDEFDALLQEFKTDYNQTHFIRNPEFKEAADKMQGPLRQ 138          

HSP 2 Score: 117.472 bits (293), Expect = 3.030e-57
Identity = 61/77 (79.22%), Postives = 64/77 (83.12%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +IFVEFLERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS   ++       GLSDF  ALDLGFLTKARKYTF
Sbjct:  138 QIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTF 214          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_GOSHI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum GN=CRD1 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 3.031e-57
Identity = 62/77 (80.52%), Postives = 66/77 (85.71%), Query Frame = 1
Query:  199 RKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            +K  KTAI ETLLTPR YTTDFDEME LF TEINK LN +EFE+LLQEFKTDYNQTHF RN EFKEAADK+ GPLRQ
Sbjct:   50 KKAAKTAIKETLLTPRFYTTDFDEMEALFNTEINKNLNQSEFESLLQEFKTDYNQTHFVRNKEFKEAADKIDGPLRQ 126          

HSP 2 Score: 115.161 bits (287), Expect = 3.031e-57
Identity = 60/77 (77.92%), Postives = 63/77 (81.82%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +IFVEF ERSCTAEFSGFLLYKELGRRLKKTNP VAEIFSLMS   ++       GLSDF  ALDLGFLTKARKYTF
Sbjct:  126 QIFVEFSERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTF 202          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CTH1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2, chloroplastic OS=Chlamydomonas reinhardtii GN=CTH1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.774e-48
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +IF+EFLERSCTAEFSGFLLYKELGRRLK TNP VAEIF+LMS   ++        +SDF  ALDLGFLTK RKYTF
Sbjct:  128 KIFIEFLERSCTAEFSGFLLYKELGRRLKATNPVVAEIFTLMSRDEARHAGFLNKAMSDFNLALDLGFLTKNRKYTF 204          

HSP 2 Score: 103.605 bits (257), Expect = 3.774e-48
Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            K A  ETLLTPR YTTDFDEME LF  E+NK ++  EFEA+L EFK DYNQ HF RN  FKEAA+K+QGP R+
Sbjct:   56 KVASDETLLTPRFYTTDFDEMERLFSLELNKNMDMEEFEAMLNEFKLDYNQRHFVRNETFKEAAEKIQGPTRK 128          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: CRD1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=CRD1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.634e-41
Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            RIF+EFLERSCTAEFSGFLLYKEL RR+K ++P VAE+F LMS   ++        LSDF  ALDLGFLTK R YT+
Sbjct:  128 RIFIEFLERSCTAEFSGFLLYKELARRMKASSPEVAEMFLLMSRDEARHAGFLNKALSDFNLALDLGFLTKNRTYTY 204          

HSP 2 Score: 89.7373 bits (221), Expect = 6.634e-41
Identity = 44/73 (60.27%), Postives = 49/73 (67.12%), Query Frame = 1
Query:  211 KTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            K A  ETLLTPR YTTDFDEME LF  EIN  L+  E  A L EF+ DYN+ HF RN  FK AADK+ G  R+
Sbjct:   56 KVAAKETLLTPRFYTTDFDEMEQLFSKEINPNLDMEELNACLNEFRNDYNKVHFVRNETFKAAADKVTGETRR 128          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_GRATL (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Gracilaria tenuistipitata var. liui GN=acsF PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.785e-36
Identity = 49/76 (64.47%), Postives = 58/76 (76.32%), Query Frame = 2
Query:  431 IFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            +FVEFLERSCTAEFSGFLLYKEL R+L K+NP +AE F LMS   ++        +SDF  +LDLGFLTK+RKYTF
Sbjct:   77 LFVEFLERSCTAEFSGFLLYKELSRKLDKSNPVIAECFLLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTF 152          

HSP 2 Score: 72.4034 bits (176), Expect = 5.785e-36
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 1
Query:  190 SQARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEA 399
            S ++  ++T + ETLLTPR YTTDFDEM  L  +      N  EFEALLQEF+ DYN+ HF R+ EF+++
Sbjct:    2 STSQNLSQTPVKETLLTPRFYTTDFDEMSKLDISS-----NIDEFEALLQEFRADYNRQHFIRDQEFEQS 66          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF1_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Synechocystis sp. (strain PCC 6803) GN=acsF1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.812e-36
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            ++FVEFLERSCTAEFSGFLLYKELGRRLK  NP +AE F+LMS   ++        +SDF  +LDLGFLTK+RKYTF
Sbjct:   85 QLFVEFLERSCTAEFSGFLLYKELGRRLKNKNPLLAECFNLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTF 161          

HSP 2 Score: 67.781 bits (164), Expect = 9.812e-36
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1
Query:  193 QARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            + R   KT   ET+LTPR YTTDFDEM      +++   N  E  A+L+EF+ DYN+ HF RN  F ++ D + G  RQ
Sbjct:   12 EIRPGVKTPAKETILTPRFYTTDFDEM-----AKMDISPNEDELRAILEEFRVDYNRHHFVRNESFNKSWDHIDGEKRQ 85          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF_TRIEI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Trichodesmium erythraeum (strain IMS101) GN=acsF PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.278e-35
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            R+FVEFLERSCTAEFSGFLLYKELGRRLK  +P +AE F+LMS   ++        +SDF  +LDLGFLTK+RKYTF
Sbjct:   85 RLFVEFLERSCTAEFSGFLLYKELGRRLKNKSPILAECFTLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTF 161          

HSP 2 Score: 67.781 bits (164), Expect = 1.278e-35
Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query:  190 SQARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            ++ R   K    ET+LTPR YTTDFDEM      +++  +N  E  A+L+EF+ DYN+ HF RN EF ++ D + G  R+
Sbjct:   11 TEMRPGVKVPAKETILTPRFYTTDFDEM-----AKMDISVNEDELMAILEEFRADYNRHHFVRNEEFAQSWDHIDGETRR 85          
BLAST of CF417878 vs. ExPASy Swiss-Prot
Match: ACSF3_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 3 OS=Anabaena sp. (strain PCC 7120) GN=acsF3 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.242e-35
Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 2
Query:  428 RIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPXVAEIFSLMSXG*SQACRVSEXGLSDFXYALDLGFLTKARKYTF 658
            R+FVEFLERSCTAEFSGFLLYKELGRRLK  +P +AE F+LMS   ++        +SDF  +LDLGFLTK+R YTF
Sbjct:   85 RLFVEFLERSCTAEFSGFLLYKELGRRLKDKSPVLAECFNLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRNYTF 161          

HSP 2 Score: 67.781 bits (164), Expect = 6.242e-35
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1
Query:  193 QARKXNKTAIXETLLTPRXYTTDFDEMEXLFXTEINKKLNXAEFEALLQEFKTDYNQTHFXRNXEFKEAADKMQGPLRQ 429
            + R   K    ETLLTPR YTTDFDEM       ++  +N  E  A+L+EF+TDYN+ HF R+ EF+++ D + G  R+
Sbjct:   12 EIRPGVKVPAKETLLTPRFYTTDFDEM-----ARMDISVNEDELLAILEEFRTDYNRHHFVRDAEFEKSWDHIDGDTRR 85          
The following BLAST results are available for this feature:
BLAST of CF417878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CRD1_EUPES1.382e-6083.33Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_ARATH4.734e-5877.50Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_HORVU3.030e-5777.92Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_GOSHI3.031e-5780.52Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CTH1_CHLRE3.774e-4871.43Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_CHLRE6.634e-4164.94Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_GRATL5.785e-3664.47Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF1_SYNY39.812e-3666.23Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_TRIEI1.278e-3566.23Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF3_ANASP6.242e-3564.94Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-808 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417878 ID=CF417878; Name=CF417878; organism=Citrus sinensis; type=EST; length=660bp
CAGAAATGGACATCCTGAGATGTGTCACGTGCGANCAANCCNATTATNAT
ATTCGAGTCACCATCGGCCACCACTACTAAGCCTAGGTTCAGTNTACCCG
CAAAGTGACATGTACNTCTCTGAGCACTAGATNTTGTACNATCAAAATGT
CAGCAACTTCAGGGNAAGCGGCTGCTGCCACTGCCCAAAAGCCAAGCAAG
GAAATNNAACAAAACTGCTATCNAGGAGACCCTTCTGACGCCAAGGTNTT
ATACAACAGATTTTGATGAAATGGAGANCCTTTTCNACACTGAGATCAAC
AAGAAGCTCAACCANGCTGAATTTGAGGCATTGCTTCAAGAATTCAAGAC
TGATTATAACCAGACTCACTTTGNGAGGAACAANGAGTTCAAGGAAGCTG
CTGACAAGATGCAAGGCCCTCTCAGGCAGGATCTTTGTTGAGTTCTTGGA
GAGGTCTTGCACTGCTGAGTTCTCTGGTTTCCTTCTTTACAAAGAGCTCG
GAAGGAGACTCAAGAAAACCAACCCAGNGGTAGCTGAGATTTTCTCTCTG
ATGTCCAGNGGATGAAGCCAGGCATGCCGGGTTTCTGAACANGGGCTATC
TGATTTCNATTATGCATTGGACTTGGGCTTCCTGACAAAAGCTAGGAAAT
ACACATTTTT
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