CF417902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417902 vs. ExPASy Swiss-Prot
Match: CRS1_MAIZE (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.126e-51 Identity = 107/173 (61.85%), Postives = 124/173 (71.68%), Query Frame = 3 Query: 33 EKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAERE 551 +K E PV+ T E E N LLD+LGPRF +WW LPVDADLLP V G KTP+RL P G+R L + E+T LR+LAR LP HFALGRN QGLA AILKLWEKSL+AKIAVK GIQNTNN+ MA LK LTGGT++ RNK +I+LYRGKDFLP VA + +RE Sbjct: 288 QKDEEPVK-------GTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQRE 453
BLAST of CF417902 vs. ExPASy Swiss-Prot
Match: CRS1_ORYSJ (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0360100 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.040e-50 Identity = 103/174 (59.20%), Postives = 123/174 (70.69%), Query Frame = 3 Query: 30 DEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAERE 551 D+K + P++ T E E N LLDSLGPRF +WW LPVDADLLP V +KTPFR P G+R L + E+T LR+ AR LP HF LGRN QGLA AILKLWEKSL+AK+AVK GIQNTN++ MA LK LTGGT++ RNK YI++YRGKDFLP VA ++ ERE Sbjct: 289 DDKDDKPIK-------GTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAESVIERE 455
BLAST of CF417902 vs. ExPASy Swiss-Prot
Match: CRS1_ARATH (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Arabidopsis thaliana GN=At5g16180 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44 Identity = 89/155 (57.42%), Postives = 111/155 (71.61%), Query Frame = 3 Query: 90 EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQ 554 E E + LLD LGPR+ +WW PVDADLLP V+GY TP R P R++LT+ E+T LR +A+ LP HF LGRN QGLA AI+KLWEK ++AKIA+K G NTNN+ MA+EL+ LTGG L+ RNK+ IVLYRGKDFL VA + +RE+ Sbjct: 307 EREADRLLDGLGPRYMDWWMRRPFPVDADLLPEVVNGYMTPSRRCPPNTRAKLTDEELTYLRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELRYLTGGVLILRNKYLIVLYRGKDFLSDEVADLVEDRER 461 The following BLAST results are available for this feature:
BLAST of CF417902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417902 ID=CF417902; Name=CF417902; organism=Citrus sinensis; type=EST; length=687bpback to top |