CF417919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T1841_DICDI (Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.049e-17 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 200 ESVPFFYIFIAF--LCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAWG 475 +SVP Y A L + AT L+ IY+HL YT+P +QRYIVRI+FM+P++A+ S LSL+ +YF +R+ YEA+V+Y F +LC+++G Sbjct: 44 DSVPALYAMFALASLFVLLATILSAHLIYKHLKYYTQPDHQRYIVRIVFMIPIYAIYSLLSLLLHNYQVYFALLRDCYEAYVLYMFFALCVSYG 137
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184B_MOUSE (Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.879e-17 Identity = 51/152 (33.55%), Postives = 85/152 (55.92%), Query Frame = 2 Query: 200 ESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVF---PERAIYFNSIREVYEAWVIYNFLSLCLAWGWWSWCSCAKFKRSGTKAICVSDDMLLASCTTGMGVLSGDASQGCVQFVILKPILVVA 646 +++ F+++ A L T IY HL Y+ P QR+IVRI+F+VP++A S+LSL+F + +YF ++R+ YEA+VIYNFLSLC + ++ + ++ C+ L T +G L Q +QF ++KP++ V+ Sbjct: 47 QAISGFFVWTALLITC-------HQIYMHLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEAFVIYNFLSLCYEYLGGESAIMSEIRGKAIESSCMYGTCCLWGKTYSIGFLR-FCKQATLQFCVVKPLMAVS 190
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184A_HUMAN (Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.160e-16 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 251 ATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVF---PERAIYFNSIREVYEAWVIYNFLSLCLAWGWWSWCSCAKFKRSGTKAICVSDDMLLASCTTGMGVLSGDASQGCVQFVILKPILVV 643 A L IY HL +YT P QRYI+R++ +VP++A S+LSL+ + +YF+S+R+ YEA+VIY+FLSLC + A+ + K+ C+ L T +G L Q +QF ++KP++ V Sbjct: 66 ALVLTCHQIYLHLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLLLLGDHQYYVYFDSVRDCYEAFVIYSFLSLCFQYLGGEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLR-FCKQATLQFCLVKPVMAV 198
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184A_BOVIN (Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.514e-16 Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 275 IYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVF---PERAIYFNSIREVYEAWVIYNFLSLCLAWGWWSWCSCAKFKRSGTKAICVSDDMLLASCTTGMGVLSGDASQGCVQFVILKPILVV 643 IY HL +YT P QRYI+R++F+VP++A S+LSL+ + IYF+S+R+ YEA+VIY+FLSLC + A+ + + C L T +G L Q +QF I+KPI+ + Sbjct: 64 IYLHLRSYTVPHEQRYIIRLLFIVPVYAFDSWLSLLLLGGHQHYIYFDSVRDCYEAFVIYSFLSLCFQYLGGESAIMAEIRGKPVRTSCFHGTCCLRGMTYSIGFLR-FCKQATLQFCIVKPIMAL 188
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T1843_DICDI (Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.583e-16 Identity = 40/82 (48.78%), Postives = 61/82 (74.39%), Query Frame = 2 Query: 227 IAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCLAW 472 +A +C+ A L+ + IY+HL NYT P Q+YIVRI+ MVP+++V S+LSL F E ++YF+ +R+ YEA+V+Y F SL +A+ Sbjct: 4 VAGVCSGVAILLSFYLIYKHLRNYTNPELQKYIVRILIMVPIYSVDSWLSLRFVELSLYFDVVRDTYEAYVLYCFFSLIVAY 85
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184B_HUMAN (Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.374e-16 Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 200 ESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVF---PERAIYFNSIREVYEAWVIYNFLSLCLAWGWWSWCSCAKFKRSGTKAICVSDDMLLASCTTGMGVLSGDASQGCVQFVILKPILVVA 646 +++ F+++ A L T IY HL Y+ P QRYIVRI+F+VP++A S+LSL+F + +YF ++R+ YEA VIYNFLSLC + ++ + ++ C+ L T +G L Q +QF ++KP++ V+ Sbjct: 47 QAISGFFVWTALLITC-------HQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLR-FCKQATLQFCVVKPLMAVS 190
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184B_BOVIN (Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.374e-16 Identity = 52/152 (34.21%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 200 ESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVF---PERAIYFNSIREVYEAWVIYNFLSLCLAWGWWSWCSCAKFKRSGTKAICVSDDMLLASCTTGMGVLSGDASQGCVQFVILKPILVVA 646 +++ F+++ A L T IY HL Y+ P QRYIVRI+F+VP++A S+LSL+F + +YF ++R+ YEA VIYNFLSLC + ++ + ++ C+ L T +G L Q +QF ++KP++ V+ Sbjct: 47 QAISGFFVWTALLITC-------HQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLR-FCKQATLQFCVVKPLMAVS 190
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184C_XENTR (Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.730e-15 Identity = 47/113 (41.59%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 131 LETV*LIVGLNL-IC*LKKKEMGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCL 466 L V LIVG+ + I L+K E+G + +F I L TI ++++ I +HL++YT+P Q+ I+RI++MVP+++V S+++L +P+ AIY ++ RE YEA+VIYNF+ L Sbjct: 19 LYIVGLIVGVPICIWKLQKMEVGVHTKAWFIAGIFVLMTI---PISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALKYPDIAIYVDTCRECYEAYVIYNFMIFLL 128
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184C_XENLA (Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 45/108 (41.67%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 146 LIVGLNL-IC*LKKKEMGGESVPFFYIFIAFLCTIGATSLAIFHIYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVFPERAIYFNSIREVYEAWVIYNFLSLCL 466 LIVG+ + I L+K E+G + +F I L TI ++++ I +HL++YT+P Q+ I+RI++MVP+++V S+++L +P+ AIY ++ RE YEA+VIYNF+ L Sbjct: 24 LIVGVPICIWKLQKMEVGVHTKAWFIAGIFVLMTI---PISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALKYPDIAIYVDTCRECYEAYVIYNFMIFLL 128
BLAST of CF417919 vs. ExPASy Swiss-Prot
Match: T184A_MOUSE (Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 42/126 (33.33%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 275 IYRHLLNYTEPTYQRYIVRIIFMVPLFAVMSFLSLVF---PERAIYFNSIREVYEAWVIYNFLSLCLAWGWWSWCSCAKFKRSGTKAICVSDDMLLASCTTGMGVLSGDASQGCVQFVILKPILVV 643 IY HL +YT P QR+++R++F+VP++A S+LSL+ +YF+S+R+ YEA+VIY+FL+LC + A+ + ++ C L + + L Q +QF I+KP++ + Sbjct: 77 IYSHLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLLLLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLGGESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITFLR-FCKQATLQFCIVKPVMAL 201 The following BLAST results are available for this feature:
BLAST of CF417919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417919 ID=CF417919; Name=CF417919; organism=Citrus sinensis; type=EST; length=647bpback to top |