CF417950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 367.081 bits (941), Expect = 2.678e-118 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG Sbjct: 374 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 548 HSP 2 Score: 78.5666 bits (192), Expect = 2.678e-118 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 +GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL Sbjct: 547 KGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 3.831e-117 Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITD+IHPAGWHEWDGNFALNTLFYGEHQN+GAGAGTSGRVKWKG Sbjct: 374 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKG 548 HSP 2 Score: 78.5666 bits (192), Expect = 3.831e-117 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1 Query: 523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 +GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL Sbjct: 547 KGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.973e-101 Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 3 Query: 6 SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 SKHQAVAL VG+DLSAFY CDMLAYQDTLYVHSNRQFFV CL+AGTVDFIFGN AAV Q+CDIHAR+P SGQKNMVTAQGR DPNQNTGIVIQK RIGATSDL+PVQ SFPTYLGRPWKEYSRTVIMQSSITDVI PAGWHEW+GNFAL+TLFYGE+ N GAGA TSGRVKWKG Sbjct: 374 SKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKG 547 HSP 2 Score: 66.6254 bits (161), Expect = 1.973e-101 Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 +G +VITS+TEAQA+TPG FIAG SWL STGFPFSLGL Sbjct: 546 KGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 2.167e-100 Identity = 149/174 (85.63%), Postives = 163/174 (93.68%), Query Frame = 3 Query: 6 SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 +KHQAVALRVG+DLSAFY CD+LAYQD+LYVHSNRQFF+NC IAGTVDFIFGNAA VLQ+CDIHAR+P SGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDL+PVQ SFPTYLGRPWKEYSRTV+MQSSIT+VI+PAGW WDGNFAL+TL+YGE+QN GAGA TSGRV WKG Sbjct: 110 AKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKG 283 HSP 2 Score: 65.855 bits (159), Expect = 2.167e-100 Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 +GF+VITS+TEAQ FTPGSFIAG SWL +T FPFSLGL Sbjct: 282 KGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 313.538 bits (802), Expect = 6.297e-97 Identity = 148/175 (84.57%), Postives = 159/175 (90.86%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 PSKHQAVALRVG+D SAFYNCDMLAYQDTLYVHSNRQFFV CLIAGTVDFIFGNAA VLQ+CDIHAR+PNSGQKNMVTAQGR DPNQNTGIVIQK RIGATSDL+ V+GSFPTYLGRPWKEYS+TVIMQS+I+DVI P GW EW G FALNTL Y E+ N GAGAGT+ RVKW+G Sbjct: 382 PSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRG 556 HSP 2 Score: 60.8474 bits (146), Expect = 6.297e-97 Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1 Query: 523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 RGF+VIT+A EAQ +T G FI G WL STGFPFSLGL Sbjct: 555 RGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 2.617e-92 Identity = 142/175 (81.14%), Postives = 154/175 (88.00%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 PSKHQAVALRVG+D SAFY CDM AYQDTLYVHSNRQFFV C I GTVDFIFGNAAAVLQ+CDI+AR+PNSGQKNMVTAQGR+DPNQNTGIVIQ RIG TSDL V+G+FPTYLGRPWKEYSRTVIMQS I+DVI P GWHEW G+FAL+TL Y E+ N G GAGT+ RVKWKG Sbjct: 377 PSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKG 551 HSP 2 Score: 58.151 bits (139), Expect = 2.617e-92 Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 1 Query: 523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 +G++VITS TEAQ FT G FI G WL STGFPFSL L Sbjct: 550 KGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.870e-70 Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 P+ HQAVALR G+DLS FY C YQDTLYVHS RQF+ C I GTVDFIFGNAA VLQNC+I ARKP + + N +TAQGR DPNQ+TGI+I R+ A SDLKPVQ S T+LGRPWK+YSRTV +++ + +I+PAGW EW G+FALNTL+Y E+ N G G+ T+ RVKW+G Sbjct: 301 PNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPN-RTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRG 474 HSP 2 Score: 47.3654 bits (111), Expect = 2.870e-70 Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 1 Query: 523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 RG+ V+TS ++ FT G+FIAG+SWL +T PF+ GL Sbjct: 473 RGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.088e-69 Identity = 113/175 (64.57%), Postives = 133/175 (76.00%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 PSKHQAVALR GAD SAFY C + YQDTLYVHS RQF+ C + GT+DFIFGNAAAVLQ C+++ARKPN QKN+ TAQGR DPNQNTGI I ++ A +DL PV SF TYLGRPWKEYSRTV + S + +I PAGW EW G+FAL TL+Y E++N G G+ T+ RV W G Sbjct: 110 PSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPG 284 HSP 2 Score: 36.965 bits (84), Expect = 9.088e-69 Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 1 Query: 526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 G+ V T+ TE FT G+FI GS WL S P L L Sbjct: 284 GYAVTTNETEVIQFTVGNFIQGSQWLTSYNIPVYLNL 320
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.287e-67 Identity = 111/175 (63.43%), Postives = 129/175 (73.71%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 P+KHQAVALR+GAD + Y C+++ YQDTLYVHSNRQFF C I GTVDFIFGNAA VLQNC I+ARKP QKN +TAQ R DPNQNTGI I SR+ A SDL+ GS TYLGRPWK +SRTV M S I +H GW EW+ FAL+TL+YGE+ N+G G+G RV W G Sbjct: 386 PAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPG 560 HSP 2 Score: 44.669 bits (104), Expect = 1.287e-67 Identity = 22/37 (59.46%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 G+RVI S EA FT FI GSSWL STG F GL Sbjct: 560 GYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 2.853e-67 Identity = 108/175 (61.71%), Postives = 131/175 (74.86%), Query Frame = 3 Query: 3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527 P+KHQAVALRVG D + Y C+++ YQD LYVHSNRQFF C I GTVDFIFGNAA +LQ+C+I+ARKP + QK +TAQ R DPNQNTGI I ++ AT DL+ +GS+PTYLGRPWK YSR V M S + D I P GW EW+G FAL++L+YGE+ N G G+G RVKW G Sbjct: 375 PAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPG 549 HSP 2 Score: 45.4394 bits (106), Expect = 2.853e-67 Identity = 22/37 (59.46%), Postives = 24/37 (64.86%), Query Frame = 1 Query: 526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636 G+ VITS EA FT FI+GSSWL STG F GL Sbjct: 549 GYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585 The following BLAST results are available for this feature:
BLAST of CF417950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417950 ID=CF417950; Name=CF417950; organism=Citrus sinensis; type=EST; length=665bpback to top |