CF417950

Overview
NameCF417950
Unique NameCF417950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 2.678e-118
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG
Sbjct:  374 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 548          

HSP 2 Score: 78.5666 bits (192), Expect = 2.678e-118
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            +GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
Sbjct:  547 KGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 3.831e-117
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITD+IHPAGWHEWDGNFALNTLFYGEHQN+GAGAGTSGRVKWKG
Sbjct:  374 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKG 548          

HSP 2 Score: 78.5666 bits (192), Expect = 3.831e-117
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            +GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL
Sbjct:  547 KGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.973e-101
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 3
Query:    6 SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            SKHQAVAL VG+DLSAFY CDMLAYQDTLYVHSNRQFFV CL+AGTVDFIFGN AAV Q+CDIHAR+P SGQKNMVTAQGR DPNQNTGIVIQK RIGATSDL+PVQ SFPTYLGRPWKEYSRTVIMQSSITDVI PAGWHEW+GNFAL+TLFYGE+ N GAGA TSGRVKWKG
Sbjct:  374 SKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKG 547          

HSP 2 Score: 66.6254 bits (161), Expect = 1.973e-101
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            +G +VITS+TEAQA+TPG FIAG SWL STGFPFSLGL
Sbjct:  546 KGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 2.167e-100
Identity = 149/174 (85.63%), Postives = 163/174 (93.68%), Query Frame = 3
Query:    6 SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            +KHQAVALRVG+DLSAFY CD+LAYQD+LYVHSNRQFF+NC IAGTVDFIFGNAA VLQ+CDIHAR+P SGQKNMVTAQGR DPNQNTGIVIQKSRIGATSDL+PVQ SFPTYLGRPWKEYSRTV+MQSSIT+VI+PAGW  WDGNFAL+TL+YGE+QN GAGA TSGRV WKG
Sbjct:  110 AKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKG 283          

HSP 2 Score: 65.855 bits (159), Expect = 2.167e-100
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            +GF+VITS+TEAQ FTPGSFIAG SWL +T FPFSLGL
Sbjct:  282 KGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 6.297e-97
Identity = 148/175 (84.57%), Postives = 159/175 (90.86%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            PSKHQAVALRVG+D SAFYNCDMLAYQDTLYVHSNRQFFV CLIAGTVDFIFGNAA VLQ+CDIHAR+PNSGQKNMVTAQGR DPNQNTGIVIQK RIGATSDL+ V+GSFPTYLGRPWKEYS+TVIMQS+I+DVI P GW EW G FALNTL Y E+ N GAGAGT+ RVKW+G
Sbjct:  382 PSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRG 556          

HSP 2 Score: 60.8474 bits (146), Expect = 6.297e-97
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            RGF+VIT+A EAQ +T G FI G  WL STGFPFSLGL
Sbjct:  555 RGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 300.827 bits (769), Expect = 2.617e-92
Identity = 142/175 (81.14%), Postives = 154/175 (88.00%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            PSKHQAVALRVG+D SAFY CDM AYQDTLYVHSNRQFFV C I GTVDFIFGNAAAVLQ+CDI+AR+PNSGQKNMVTAQGR+DPNQNTGIVIQ  RIG TSDL  V+G+FPTYLGRPWKEYSRTVIMQS I+DVI P GWHEW G+FAL+TL Y E+ N G GAGT+ RVKWKG
Sbjct:  377 PSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKG 551          

HSP 2 Score: 58.151 bits (139), Expect = 2.617e-92
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            +G++VITS TEAQ FT G FI G  WL STGFPFSL L
Sbjct:  550 KGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.870e-70
Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+ HQAVALR G+DLS FY C    YQDTLYVHS RQF+  C I GTVDFIFGNAA VLQNC+I ARKP + + N +TAQGR DPNQ+TGI+I   R+ A SDLKPVQ S  T+LGRPWK+YSRTV +++ +  +I+PAGW EW G+FALNTL+Y E+ N G G+ T+ RVKW+G
Sbjct:  301 PNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPN-RTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRG 474          

HSP 2 Score: 47.3654 bits (111), Expect = 2.870e-70
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 1
Query:  523 RGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            RG+ V+TS ++   FT G+FIAG+SWL +T  PF+ GL
Sbjct:  473 RGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 9.088e-69
Identity = 113/175 (64.57%), Postives = 133/175 (76.00%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            PSKHQAVALR GAD SAFY C  + YQDTLYVHS RQF+  C + GT+DFIFGNAAAVLQ C+++ARKPN  QKN+ TAQGR DPNQNTGI I   ++ A +DL PV  SF TYLGRPWKEYSRTV + S +  +I PAGW EW G+FAL TL+Y E++N G G+ T+ RV W G
Sbjct:  110 PSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKNTGPGSNTTARVTWPG 284          

HSP 2 Score: 36.965 bits (84), Expect = 9.088e-69
Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ V T+ TE   FT G+FI GS WL S   P  L L
Sbjct:  284 GYAVTTNETEVIQFTVGNFIQGSQWLTSYNIPVYLNL 320          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.287e-67
Identity = 111/175 (63.43%), Postives = 129/175 (73.71%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+KHQAVALR+GAD +  Y C+++ YQDTLYVHSNRQFF  C I GTVDFIFGNAA VLQNC I+ARKP   QKN +TAQ R DPNQNTGI I  SR+ A SDL+   GS  TYLGRPWK +SRTV M S I   +H  GW EW+  FAL+TL+YGE+ N+G G+G   RV W G
Sbjct:  386 PAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPG 560          

HSP 2 Score: 44.669 bits (104), Expect = 1.287e-67
Identity = 22/37 (59.46%), Postives = 23/37 (62.16%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+RVI S  EA  FT   FI GSSWL STG  F  GL
Sbjct:  560 GYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596          
BLAST of CF417950 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 2.853e-67
Identity = 108/175 (61.71%), Postives = 131/175 (74.86%), Query Frame = 3
Query:    3 PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKG 527
            P+KHQAVALRVG D +  Y C+++ YQD LYVHSNRQFF  C I GTVDFIFGNAA +LQ+C+I+ARKP + QK  +TAQ R DPNQNTGI I   ++ AT DL+  +GS+PTYLGRPWK YSR V M S + D I P GW EW+G FAL++L+YGE+ N G G+G   RVKW G
Sbjct:  375 PAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPG 549          

HSP 2 Score: 45.4394 bits (106), Expect = 2.853e-67
Identity = 22/37 (59.46%), Postives = 24/37 (64.86%), Query Frame = 1
Query:  526 GFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 636
            G+ VITS  EA  FT   FI+GSSWL STG  F  GL
Sbjct:  549 GYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
The following BLAST results are available for this feature:
BLAST of CF417950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME3_CITSI2.678e-118100.00Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI3.831e-11798.29Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PMEU1_SOLLC1.973e-10187.93Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME_DAUCA2.167e-10085.63Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME3_ARATH6.297e-9784.57Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH2.617e-9281.14Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME2_CITSI2.870e-7063.43Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME_ACTDE9.088e-6964.57Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME34_ARATH1.287e-6763.43Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME61_ARATH2.853e-6761.71Probable pectinesterase/pectinesterase inhibitor 6... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-880 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417950 ID=CF417950; Name=CF417950; organism=Citrus sinensis; type=EST; length=665bp
GCCCCTCAAAGCACCAGGCGGTGGCACTACGAGTGGGAGCTGACCTTTCA
GCATTTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCA
CTCGAACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATT
TTATTTTTGGTAACGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCA
CGAAAGCCCAATTCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGGC
TGACCCTAACCAAAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTG
CCACCTCCGATTTAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGC
AGGCCCTGGAAGGAGTACTCGAGGACGGTGATCATGCAGTCATCGATTAC
TGACGTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGT
TGAACACATTGTTTTACGGAGAGCATCAGAACGCCGGAGCCGGTGCCGGA
ACTTCAGGGAGAGTGAAATGGAAGGGGATTTAGGGTTATTACAAGTGCTA
CCGAGGCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGG
CTGGGCTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGG
AGTTTTAATTAATAT
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