CF417963

Overview
NameCF417963
Unique NameCF417963
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1B_DICDI (Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-25
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 2
Query:    5 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLS-VVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRE 274
            D+  F    ++Y   G  ++RGYLLYGPPGTGKSS I A+A  +   I  LNL+    SD+SL  LL   P RSI+++EDID +I+  N +
Sbjct:  222 DVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSDTSLNQLLATAPQRSIILLEDIDSAIQTGNHD 312          

HSP 2 Score: 58.9214 bits (141), Expect = 1.443e-25
Identity = 34/104 (32.69%), Postives = 55/104 (52.88%), Query Frame = 3
Query:  294 PADSYRGPQVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELM 605
            P+ S  G  +T +GLLNA+DG+    G  +I   TTN+ +++D  L+R GR+D  I +  C+    +Q+   +    D DL     + +E  K SPA++    M
Sbjct:  339 PSVSSGGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGLCSSYQMEQMFLKFYP-TDFDLAKQFVEKLENYKFSPAQLQAYFM 439          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1_SCHPO (Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe GN=SPAC644.07 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.593e-22
Identity = 36/94 (38.30%), Postives = 63/94 (67.02%), Query Frame = 2
Query:    2 NDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVV-TSDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQ 280
            +D+  F R  ++Y   G  ++RGYLLYGPPG+GK+S + A+A  ++YDI  LNL+    +D  L +LL +VP ++++++ED+D + + + R  +
Sbjct:  222 DDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRERSGE 315          

HSP 2 Score: 50.0618 bits (118), Expect = 6.593e-22
Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 3
Query:  321 VTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANY 512
            VT +GLLNA+DG+     DE+I   TTN+ +++DPAL+R GR+D    L   T    +++   +
Sbjct:  322 VTFSGLLNALDGVTS--SDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRF 383          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1A_DICDI (Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum GN=bcs1la PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.117e-21
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 2
Query:    5 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVV-TSDSSLEYLLLHVPNRSILVVEDIDCSIK 259
            D+  F   + +YR  G  ++RGYLLYG PG GKSSLI A+A  +N DI  ++LS     D  + +LL + P +SIL++EDID + K
Sbjct:  202 DIKSFITNESWYRNRGIPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSILLIEDIDAAFK 287          

HSP 2 Score: 50.447 bits (119), Expect = 1.117e-21
Identity = 33/104 (31.73%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  300 DSYRGPQVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDI-NDHDLYCHIEKLMEKVKVSPAEVAGELMK 608
            +S     +T +GLLNA+DG+    G  +I   TTN  + +D AL+R GR+D  I +S  T S   QL  ++ ++  D+ L     + +   ++S +++ G L+K
Sbjct:  299 NSNNNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNATKSQAAQLFTHFYNLPTDNQLAIRFSENLHDHQLSMSQIQGFLLK 400          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1_YEAST (Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae GN=BCS1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.406e-21
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 2
Query:    2 NDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQ 280
            +D+  F +  ++Y   G  ++RGYLLYGPPG+GK+S I A+A  ++Y+I  LNLS    +D  L +L+ ++P RSIL++EDID +    N+ SQ
Sbjct:  240 DDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF---NKRSQ 330          

HSP 2 Score: 46.595 bits (109), Expect = 5.406e-21
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 3
Query:  270 ASLXKGDEPADSYRGPQVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCT 479
            A+  K  +  +      VT +GLLNA+DG+     +E IT  TTN+ +++D A++R GR+D  + +   T
Sbjct:  323 AAFNKRSQTGEQGFHSSVTFSGLLNALDGVTS--SEETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNAT 390          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1_XENLA (Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.044e-21
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 2
Query:    5 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCSIKLQNRESQ 280
            D+  F    ++Y   G  ++RGYLLYGPPG GKSS I A+A  + Y I  ++LS  + SD  L +LL   P +SI+++ED+D +   ++   Q
Sbjct:  204 DVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQ 296          

HSP 2 Score: 52.373 bits (124), Expect = 7.044e-21
Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 3
Query:  303 SYRGP-QVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYL---DINDHDLYCHIEKLMEKVKVSPAEVAGELMKAK 614
            +Y+G  ++T +GLLNA+DG+     + +I   TTN+ DR+DPAL+R GR+D    + +CT     Q+   +         + +     L    K+S A+V G  M  K
Sbjct:  300 AYQGMGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCTNWQLSQMFLRFYPDQTAGQSEAFAS-AALSSSDKISAAQVQGHFMMHK 404          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1_MOUSE (Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.192e-20
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 2
Query:    5 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCS 253
            D+  F    ++Y   G  ++RGYLLYGPPG GKSS I A+A  + + I  L+L+  + SD  L +LL   P +S++++ED+D +
Sbjct:  204 DIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287          

HSP 2 Score: 57.3806 bits (137), Expect = 1.192e-20
Identity = 35/101 (34.65%), Postives = 55/101 (54.46%), Query Frame = 3
Query:  318 QVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKV--KVSPAEVAGELMKAK 614
            ++T +GLLNA+DG+     + +I   TTNY DR+DPAL+R GR+D    + YC+     Q+   +       L  +  + + K   ++SPA+V G  M  K
Sbjct:  306 RLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHVLKATSEISPAQVQGYFMLYK 404          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1_HUMAN (Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.016e-20
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 2
Query:    5 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCS 253
            D+  F    ++Y   G  ++RGYLLYGPPG GKSS I A+A  + + I  L+L+  + SD  L +LL   P +S++++ED+D +
Sbjct:  204 DVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287          

HSP 2 Score: 55.4546 bits (132), Expect = 2.016e-20
Identity = 36/104 (34.62%), Postives = 54/104 (51.92%), Query Frame = 3
Query:  318 QVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHIEKLMEKV-----KVSPAEVAGELMKAK 614
            ++T +GLLNA+DG+     + +I   TTN+ DR+DPAL+R GR+D    + YC+     Q+   +       L    E   E V     ++SPA+V G  M  K
Sbjct:  306 RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSL---AENFAEHVLRATNQISPAQVQGYFMLYK 404          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1_DANRE (Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.771e-20
Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 2
Query:    2 NDLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCS 253
            +D+  F    ++Y   G  ++RGYLLYGPPG GKSS I A+A  + Y I  ++LS  + SD  L +LL   P +SI+++ED+D +
Sbjct:  203 DDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSLSDDRLNHLLSVAPQQSIILLEDVDAA 287          

HSP 2 Score: 50.8322 bits (120), Expect = 5.771e-20
Identity = 33/107 (30.84%), Postives = 55/107 (51.40%), Query Frame = 3
Query:  303 SYRGP-QVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCTFSTFKQLAANYLDINDHDLYCHI--EKLMEKVKVSPAEVAGELMKAK 614
            +Y+G  ++T +GLLNA+DG+     + +I   TTN+ +R+DPAL+R GR+D    + +C+     Q+   +          H   + L     +S A+V G  M  K
Sbjct:  301 AYQGMGRLTFSGLLNALDGV--ASSEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHWQLTQMFRRFYPQESAAEADHFSEQALAAHTDLSAAQVQGHFMLYK 405          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: BCS1_BOVIN (Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.270e-19
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 2
Query:    5 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNLSVVT-SDSSLEYLLLHVPNRSILVVEDIDCS 253
            D+  F    ++Y   G  ++RGYLLYGPPG GKSS I A+A  + + I  L+L+  + SD  L +LL   P +S++++ED+D +
Sbjct:  204 DIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287          

HSP 2 Score: 53.9138 bits (128), Expect = 1.270e-19
Identity = 37/106 (34.91%), Postives = 54/106 (50.94%), Query Frame = 3
Query:  318 QVTLAGLLNAIDGLLCCCGDEKITIFTTNYKDRIDPALLRAGRMDRHINLSYCT-------FSTFKQLAANYLDINDHDLYCHIEKLMEKVKVSPAEVAGELMKAK 614
            ++T +GLLNA+DG+     + +I   TTN+ DR+DPAL+R GR+D    + +C+       F  F    A  L  N  D       L    ++SPA+V G  M  K
Sbjct:  306 RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQLTQMFQRFYPGQATSLAENFAD-----RVLQATTQISPAQVQGYFMLYK 404          
BLAST of CF417963 vs. ExPASy Swiss-Prot
Match: YR776_MIMIV (Uncharacterized protein R776 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R776 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11
Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 2
Query:    5 DLDCFRRGKEYYRKIGKVWKRGYLLYGPPGTGKSSLIAAMANYMNYDIYNLNL-SVVTSDSSLEYLLLHVPNRSILVVEDIDCSIKLQN 268
            D+D F R ++ YR++G  ++RG LLYG  G GK+ LI+ ++N    D Y LNL S   SDS L  L  +V  RSILV+E+ID  I+  N
Sbjct:  182 DVDVFMRNEDTYRELGANYRRGMLLYGESGCGKTGLISIISNKYGMDSYILNLNSKDMSDSVLISLASNVKARSILVIEEIDKQIETLN 270          
The following BLAST results are available for this feature:
BLAST of CF417963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
BCS1B_DICDI1.443e-2546.15Probable mitochondrial chaperone BCS1-B OS=Dictyos... [more]
BCS1_SCHPO6.593e-2238.30Probable mitochondrial chaperone bcs1 OS=Schizosac... [more]
BCS1A_DICDI1.117e-2145.35Probable mitochondrial chaperone BCS1-A OS=Dictyos... [more]
BCS1_YEAST5.406e-2143.62Mitochondrial chaperone BCS1 OS=Saccharomyces cere... [more]
BCS1_XENLA7.044e-2139.78Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=... [more]
BCS1_MOUSE1.192e-2040.48Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bc... [more]
BCS1_HUMAN2.016e-2040.48Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BC... [more]
BCS1_DANRE5.771e-2042.35Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs... [more]
BCS1_BOVIN1.270e-1940.48Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1... [more]
YR776_MIMIV1.325e-1146.07Uncharacterized protein R776 OS=Acanthamoeba polyp... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-893 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417963 ID=CF417963; Name=CF417963; organism=Citrus sinensis; type=EST; length=706bp
GAACGATCTTGATTGTTTCAGAAGAGGGAAGGAGTATTACAGGAAGATCG
GTAAAGTTTGGAAGAGAGGTTACTTGTTGTACGGGCCACCGGGAACCGGC
AAGTCCAGTTTGATTGCTGCTATGGCTAATTATATGAATTATGATATTTA
CAACTTGAACTTATCGGTTGTCACTTCCGATTCTTCACTTGAGTACTTGC
TGCTCCATGTGCCTAACCGTTCAATTCTTGTTGTCGAGGATATCGACTGT
TCTATCAAACTACAGAATCGCGAGTCTCAGNAAGGGGGATGAACCAGCTG
ATTCCTATCGGGGACCTCAGGTGACTCTTGCTGGACTACTGAATGCCATT
GATGGTCTGCTCTGCTGCTGTGGAGACGAAAAGATCACTATCTTCACTAC
TAACTACAAAGATAGAATCGACCCTGCATTACTGCGAGCAGGGCGTATGG
ACAGGCACATAAACCTCTCCTATTGTACATTCTCCACCTTCAAGCAGCTG
GCAGCCAACTACTTGGATATTAATGATCATGATCTTTATTGTCACATTGA
AAAACTTATGGAAAAGGTCAAAGTTTCCCCTGCTGAGGTTGCCGGTGAAC
TCATGAAGGCCAAAGGTTCAAAGACCTCCCTTGAGGACTTCATCACCTAT
TTGGAGAGCAAGGAATCACAAGAAGAAAAATCCTCAACTGCTCCTCCGTT
GGCATC
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