CF417965
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS212_ARATH (40S ribosomal protein S21-2 OS=Arabidopsis thaliana GN=RPS21C PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.468e-35 Identity = 67/82 (81.71%), Postives = 77/82 (93.90%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 303 MQNEEGQ +LYIPRKCSATNRLITSKDHA+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +Q+ Sbjct: 1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQK 82
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS211_ARATH (40S ribosomal protein S21-1 OS=Arabidopsis thaliana GN=RPS21B PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.564e-34 Identity = 64/82 (78.05%), Postives = 76/82 (92.68%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 303 M+N+ GQ +LYIPRKCSATNR+ITSKDHA+VQ+NIGH+DA+G+YTGQF+TFALCGFVRAQGD DS +DRLWQKKKVE +QQ Sbjct: 1 MENDAGQVTELYIPRKCSATNRMITSKDHASVQLNIGHLDANGLYTGQFTTFALCGFVRAQGDADSGVDRLWQKKKVEAKQQ 82
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_ORYSJ (40S ribosomal protein S21 OS=Oryza sativa subsp. japonica GN=RPS21 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.769e-33 Identity = 63/82 (76.83%), Postives = 76/82 (92.68%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQQ 303 MQNEEGQ +DLY+PRKCSATNR+IT+KDHA+VQINIGHVD +G+Y G+F+TFAL GF+RAQGD DSA+DRLWQK+K EV+QQ Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVDENGLYDGRFTTFALSGFIRAQGDADSALDRLWQKRKAEVKQQ 82
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_MAIZE (40S ribosomal protein S21 OS=Zea mays GN=RPS21 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.779e-33 Identity = 61/81 (75.31%), Postives = 75/81 (92.59%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKVEVRQ 300 MQNEEG+ +DLY+PRKCSATNR+IT+KDHA+VQINIGH+DA+G+Y G F+TFAL GFVRAQGD DS++DRLWQKKK E++Q Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLDANGLYDGHFTTFALSGFVRAQGDADSSLDRLWQKKKAEIKQ 81
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_CYAPA (40S ribosomal protein S21 OS=Cyanophora paradoxa GN=RPS21 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.344e-24 Identity = 51/75 (68.00%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDAD-GIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 279 MQN+EG+ +DLYIPRKCSATNRLI++ DHAAVQIN+GHVD + G+YTG ++TFALCGFVR+ G+ D+A++RL K Sbjct: 1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVRSMGESDAALNRLCVK 75
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_DICDI (40S ribosomal protein S21 OS=Dictyostelium discoideum GN=rps21 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.029e-21 Identity = 45/71 (63.38%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 70 EGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKK 282 + +N++LY PRKCSATNRLIT+KDHA+VQINIGHV+A+GIY G+ + FA CGF+R G D+A++RL Q+K Sbjct: 2 DSKNVELYTPRKCSATNRLITAKDHASVQINIGHVNAEGIYNGEQTIFAFCGFLRNNGQSDAALNRLAQQK 72
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_ASPFU (40S ribosomal protein S21 OS=Aspergillus fumigatus GN=rps21 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.315e-20 Identity = 42/74 (56.76%), Postives = 62/74 (83.78%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 279 M+NE+G+ +DLY+PRKCSATNR+I + DHA+VQI+I VD +G YTG+ ++ALCGF+RA+G+ D +++RL Q+ Sbjct: 1 MENEKGEIVDLYVPRKCSATNRIIKANDHASVQISIAKVDENGRYTGENQSYALCGFIRARGESDDSLNRLCQR 74
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_BRABE (40S ribosomal protein S21 OS=Branchiostoma belcheri GN=RPS21 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.742e-18 Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVD-ADGIYTGQFSTFALCGFVRAQGDGDSAIDRLWQKKKV 288 MQN+ G+ +DLYIPRKCS+TNR+I +KDHA++QIN VD G TGQ+ T+A+CG++R G+ D + RL K K+ Sbjct: 1 MQNDAGEVVDLYIPRKCSSTNRIIGAKDHASIQINFAEVDPTTGRMTGQYKTYAICGYIRQMGESDDCLKRLAIKDKI 78
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_ASHGO (40S ribosomal protein S21 OS=Ashbya gossypii GN=RPS21 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.977e-18 Identity = 41/75 (54.67%), Postives = 60/75 (80.00%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADG-IYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 279 M+N++GQ ++LY+PRKCSATNR+I +KDH +VQINI VD +G G++ T+AL G+VRA+G+ D +++RL QK Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKAKDHGSVQINIAQVDENGHAVPGEYITYALSGYVRARGEADDSMNRLAQK 75
BLAST of CF417965 vs. ExPASy Swiss-Prot
Match: RS21_KLULA (40S ribosomal protein S21 OS=Kluyveromyces lactis GN=RPS21 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17 Identity = 39/75 (52.00%), Postives = 61/75 (81.33%), Query Frame = 1 Query: 58 MQNEEGQNMDLYIPRKCSATNRLITSKDHAAVQINIGHVDADG-IYTGQFSTFALCGFVRAQGDGDSAIDRLWQK 279 M+N++GQ ++LY+PRKCSATNR+I +KDH++VQINI VD +G G++ T+AL G++RA+G+ D +++RL Q+ Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKAKDHSSVQINIAQVDEEGRAIPGEYVTYALSGYIRARGEADDSLNRLAQQ 75 The following BLAST results are available for this feature:
BLAST of CF417965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417965 ID=CF417965; Name=CF417965; organism=Citrus sinensis; type=EST; length=501bpback to top |