CF417967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO2_CRIGR (Protein slowmo homolog 2 OS=Cricetulus griseus GN=SLMO2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.693e-19 Identity = 56/154 (36.36%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K +T EH++ HPWE VT+A+ +K+ +P N ++ VD L+ +DP SGKL++ R L+ P V+ +IG + + E +VVD K+M+L + N+S + V+E++ Y+PHP +P TV QE I +K +S L+S E + A+ Sbjct: 1 MKIWTSEHVFDHPWEMVTTAAMQKYPNPMNPS----VVGVDVLDRHVDP-SGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVKKTMELKSTNISFTNMVSVDERLTYKPHPQDPEK-TVLTQEAIITVKGVS-LSSYLEGLMAS 147
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO2_HUMAN (Protein slowmo homolog 2 OS=Homo sapiens GN=SLMO2 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19 Identity = 56/154 (36.36%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K +T EH++ HPWE VT+A+ +K+ +P N ++ VD L+ +DP SGKL++ R L+ P V+ +IG + + E +VVD K+M+L + N+S + V+E++ Y+PHP +P TV QE I +K +S L+S E + A+ Sbjct: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHIDP-SGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEK-TVLTQEAIITVKGVS-LSSYLEGLMAS 147
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO2_BOVIN (Protein slowmo homolog 2 OS=Bos taurus GN=SLMO2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19 Identity = 56/154 (36.36%), Postives = 91/154 (59.09%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K +T EH++ HPWE VT+A+ +K+ +P N ++ VD L+ +DP SGKL++ R L+ P V+ IIG + + E +VVD K+M+L + N+S + V+E++ Y+PHP +P T+ QE I +K +S L S E + A+ Sbjct: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHIDP-SGKLHSHRLLSTEWGLPSIVKSIIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPEK-TILTQEAIITVKGVS-LGSYLEGLMAS 147
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO_DICDI (Protein slowmo homolog OS=Dictyostelium discoideum GN=slmo PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.933e-19 Identity = 50/147 (34.01%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 44 TQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXA 484 T +H YKH W ++AS+RK+ PE IL +D L+ ++DP +G L T+ + P +++ I+G C E T VD ++K M L T+N++ + V+E YE HPDN WT+ QE ++ S++ +A K+ A Sbjct: 6 TIKHTYKHLWSDASTASFRKYPSPERP----DILSIDILSKEIDPTTGVLKCTKLIICKGNTPSWLKSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVDEVCTYEQHPDNEE-WTLFTQEATV----TSSIFGVARKMEA 143 HSP 2 Score: 25.0238 bits (53), Expect = 6.933e-19 Identity = 9/23 (39.13%), Postives = 16/23 (69.57%), Query Frame = 3 Query: 471 RRWXLRCAEKFMQNSVKGREVME 539 R+ C ++F+ N+ KGR++ME Sbjct: 139 RKMEAFCLDRFVANAGKGRKIME 161
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO2_MACFA (Protein slowmo homolog 2 OS=Macaca fascicularis GN=SLMO2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19 Identity = 55/154 (35.71%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K +T EH++ HPWE VT+A+ +K+ +P N ++ VD L+ +DP SGKL++ R L+ P V+ +IG + + E +VVD K+M+L + N+S + V+E++ Y+PHP +P T+ QE I +K +S L+S E + A+ Sbjct: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMNPS----VVGVDVLDRHIDP-SGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPHPQDPDK-TILTQEAIITVKGVS-LSSYLEGLMAS 147
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO2_RAT (Protein slowmo homolog 2 OS=Rattus norvegicus GN=Slmo2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.783e-18 Identity = 55/154 (35.71%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K +T EH++ HPWE VT+A+ +K+ +P N ++ VD L+ +DP SGKL++ R L+ P V+ +IG + + E +VVD ++M+L + N+S + V+E++ Y+PHP +P TV QE I +K +S L+S E + A+ Sbjct: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHVDP-SGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPIRRTMELKSTNISFTNMVSVDERLTYKPHPQDPEK-TVLTQEALITVKGVS-LSSYLEGLMAS 147
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO2_MOUSE (Protein slowmo homolog 2 OS=Mus musculus GN=Slmo2 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.156e-17 Identity = 54/154 (35.06%), Postives = 92/154 (59.74%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K +T EH++ HPWE VT+A+ +K+ +P N ++ VD L+ +DP SGKL++ R L+ P V+ +IG + + E +VVD +++M+L + N+S + V+E++ Y+PH +P TV QE I +K +S L+S E + A+ Sbjct: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHVDP-SGKLHSHRLLSTEWGLPSIVKSLIGAARTKTYVQEHSVVDPVTRTMELKSTNISFTNMVSVDERLTYKPHLQDPEK-TVLTQEALITVKGVS-LSSYLEGLMAS 147
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO1_HUMAN (Protein slowmo homolog 1 OS=Homo sapiens GN=SLMO1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.510e-17 Identity = 54/153 (35.29%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXA 484 +K ++ EH++ HPW+ V A+ RK+ +P N +L VD L ++D G+L++ R L+ P VR I+G + + + E +VVD K M+L + N++L + V E++ Y PHP+NP TV QE I +K +S L S E + A Sbjct: 1 MKIWSSEHVFGHPWDTVIQAAMRKYPNPMNPS----VLGVDVLQRRVDG-RGRLHSLRLLSTEWGLPSLVRAILGTSRTLTYIREHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPHPENPE-MTVLTQEAIITVKGIS-LGSYLESLMA 146
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO2_PIG (Protein slowmo homolog 2 OS=Sus scrofa GN=SLMO2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17 Identity = 55/154 (35.71%), Postives = 91/154 (59.09%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIG--QDICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K +T EH++ HPWE VT+A+ +K+ +P N ++ VD L+ +D SGKL++ R L+ P V+ IIG + + E +VVD +K+M+L + N+S + V+E++ Y+PHP + + TV QE I +K +S L S E + A+ Sbjct: 1 MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHID-ASGKLHSHRLLSTEWGLPSIVKSIIGAARTKTYVQEHSVVDPVAKTMELKSTNISFTNMVSVDERLIYKPHPQD-SEKTVLTQEAIITVKGVS-LGSYLEGLMAS 147
BLAST of CF417967 vs. ExPASy Swiss-Prot
Match: SLMO1_MOUSE (Protein slowmo homolog 1 OS=Mus musculus GN=Slmo1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17 Identity = 53/154 (34.42%), Postives = 87/154 (56.49%), Query Frame = 2 Query: 32 VKAYTQEHIYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNHKLDPLSGKLYTTRALTVHAPGPWFVRKIIGQD--ICHCVESTVVDAQSKSMQLTTRNVSLKKYIEVEEKIRYEPHPDNPTGWTVCRQETSIRIKPLSALASMAEKVXAT 487 +K ++ EH++ HPW+ V A+ RK+ +P N ++ VD L +D G+L++ R L+ P VR I+G + + + E +VVD ++ M+L + N++L + V E++ Y PHP+NP TV QE I +K +S L S E + AT Sbjct: 1 MKIWSSEHVFGHPWDTVIKAAMRKYPNPMNPC----VVGVDVLERSVDGC-GRLHSLRLLSTEWGLPGLVRAILGANRTLTYIKERSVVDPAARKMELCSTNITLTNLVSVNERLVYTPHPENPEK-TVLTQEAIITVKGIS-LGSYLESLMAT 147 The following BLAST results are available for this feature:
BLAST of CF417967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417967 ID=CF417967; Name=CF417967; organism=Citrus sinensis; type=EST; length=682bpback to top |