CF503850

Overview
NameCF503850
Unique NameCF503850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length382
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3618 contig Csv1_Contig3618:114..495. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503850 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.475e-14
Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 3
Query:   51 KSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAA 377
            K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V   G +VS  K GD V G ++  + A+  + DQ  L+ +P+   L  AA
Sbjct:   36 KQPLTIQEVAPRPV--GPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAVLETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAA 142          
BLAST of CF503850 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 3
Query:   51 KSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAA 377
            K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V   G +VS  K GD V G +   S A+  + DQ  L+ +P+   L  AA
Sbjct:   36 KQPLTIQEVAPRPI--GPQEVRVDVHFCGINFADNLVCRGQYQEKPPLPFTPGMEFSGVVLEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTLWRIPENVSLQDAA 142          
BLAST of CF503850 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.320e-14
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 3
Query:    3 LVCRKLGDPTVSIHDEKSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAA 380
            ++C +LG P V + D+ S      TE +     ++ VRV V +  +N+A+ L+ +GKYQEKP LPFVPG++ SG V  VG  V++   GD V G     G  A+  V  Q+ L+ +P       AAA
Sbjct:   42 VMCNELGKPLV-VEDKFS------TENL----GTSQVRVAVHSCGINFADILKCIGKYQEKPELPFVPGTEISGEVVEVGSKVTSLSKGDRVLGVCGQGGGMAEECVLPQTALWKIPSSLSFTQAAA 157          
BLAST of CF503850 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.355e-12
Identity = 39/110 (35.45%), Postives = 56/110 (50.91%), Query Frame = 3
Query:   51 KSPILLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAA 380
            K P+++ +  P P       VRV V    +N+A+ L   G+YQE+  LPF PG ++SG V   G +VS  K GD V G       A+  + D   L+ +P+   L  AAA
Sbjct:   35 KRPLVIEEVTPRPV--QPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMVLETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAA 142          
BLAST of CF503850 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 3
Query:   81 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAA 380
            P+PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS FK GD V C     G +A+F +A    ++P+P+  +    AA
Sbjct:   31 PVPQ---SHQVLIKVHACGVNPVETYIRSGAYSRKPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAA 128          
BLAST of CF503850 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 3
Query:   81 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAA 380
            P PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS FK GD V  F+ + G +A+F ++  +  +P+P+  D    AA
Sbjct:   31 PAPQ---SHQVLIKVHACGVNPVETYIRSGTYSRKPALPYTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAA 128          
The following BLAST results are available for this feature:
BLAST of CF503850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
QORL2_MOUSE1.475e-1438.53Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
QORL2_RAT2.516e-1439.45Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_NEMVE7.320e-1437.80Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORL2_BOVIN2.355e-1235.45Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
QOR_MOUSE4.441e-1136.63Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]
QOR_RAT9.893e-1136.63Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-337 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503850 ID=CF503850; Name=CF503850; organism=Citrus sinensis; type=EST; length=382bp
CACTGGTGTGCAGGAAACTGGGCGATCCAACGGTCTCAATTCACGATGAA
AAATCGCCGATTCTGTTGAGTAAAACTGAGCCAATTCCACAATTGAATTC
TTCAACTGCAGTTAGAGTCAGAGTGAAAGCCACCAGCTTGAACTACGCTA
ATTACTTGCAGATATTGGGGAAATATCAAGAGAAACCACCATTGCCCTTC
GTCCCCGGCTCCGATTATTCGGGCACTGTTGATGCGGTGGGCCCCAATGT
CTCAAATTTCAAAGTGGGTGACACTGTTTGTGGATTTGCTGCCCTTGGCT
CCTTTGCCCAATTCATCGTCGCTGATCAGTCAGAATTGTTTCCAGTGCCA
AAGGGATGTGATTTGTTGGCTGCTGCTGCACT
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