CF503891
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_ARATH (Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 2.043e-65 Identity = 111/126 (88.10%), Postives = 120/126 (95.24%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYN 440 + +EGCMHG+LDNVYKT+Q+ E I+N K+DLLLCCGDFQAVRNE DM+SLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAA NIYFLGFAGVVKFGN+RIGGLSGIYN Sbjct: 3 IAIEGCMHGDLDNVYKTIQHYEQIHNTKVDLLLCCGDFQAVRNEKDMDSLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLGFAGVVKFGNVRIGGLSGIYN 128
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_ORYSJ (Lariat debranching enzyme OS=Oryza sativa subsp. japonica GN=DBR1 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 2.858e-59 Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 + VEGCMHGELD VY TL+ +E KIDLLLCCGDFQAVRNEND++ LNV ++REMKSFWKYYSGQ VAP PTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY Sbjct: 3 IAVEGCMHGELDKVYDTLRELEKAEGVKIDLLLCCGDFQAVRNENDLQCLNVKPRFREMKSFWKYYSGQAVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_XENTR (Lariat debranching enzyme OS=Xenopus tropicalis GN=dbr1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 5.402e-50 Identity = 85/125 (68.00%), Postives = 109/125 (87.20%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 + VEGC HGELD +Y+T+Q++E N K+DLLLCCGDFQAVRNE DM+ + VP+KYR+M++F+KYYSG+++API TIFIGGNHEASNYL EL YGGW APNIY++G+AGVVK+ +RIGG+SGI+ Sbjct: 3 IAVEGCCHGELDKIYETIQFLEKKENTKVDLLLCCGDFQAVRNEGDMKCMAVPQKYRQMQTFYKYYSGEKLAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYVGYAGVVKYRGVRIGGISGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1A_XENLA (Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-A PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 1.572e-49 Identity = 85/125 (68.00%), Postives = 107/125 (85.60%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 + VEGC HGELD +Y+T+Q++E N K+DLLLCCGDFQAVRNE DM+ + VP KYR+M++F+KYYSG++ API TIFIGGNHEASNYL EL YGGW APNIY++G+AGVVK+ +RIGG+SGI+ Sbjct: 3 IAVEGCCHGELDKIYETIQFLEKKENTKVDLLLCCGDFQAVRNEGDMKCMAVPMKYRQMQTFYKYYSGEKKAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYMGYAGVVKYRGVRIGGISGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1B_XENLA (Lariat debranching enzyme B OS=Xenopus laevis GN=dbr1-B PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.801e-49 Identity = 84/125 (67.20%), Postives = 107/125 (85.60%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 + VEGC HGELD +Y+T+Q++E N K++LLLCCGDFQAVRNE DM+ + VP KYR+M++F+KYYSG++ API TIFIGGNHEASNYL EL YGGW APNIY++G+AGVVK+ +RIGG+SGI+ Sbjct: 3 IAVEGCCHGELDKIYETIQFLEKKENTKVELLLCCGDFQAVRNEGDMKCMAVPVKYRQMQTFYKYYSGEKKAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYMGYAGVVKYRGVRIGGISGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_DANRE (Lariat debranching enzyme OS=Danio rerio GN=dbr1 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 3.872e-48 Identity = 82/123 (66.67%), Postives = 105/123 (85.37%), Query Frame = 3 Query: 69 VEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 VEGC HGELD +Y+++ Y+EN + K+DLLLCCGDFQAVRNE DM+ + VP KYR M++F+KYYSG++ AP+ TIFIGGNHEASN+L EL YGGW APNIY+LG+AGV+++ +RIGGLSGI+ Sbjct: 5 VEGCCHGELDKIYESISYLENKDGVKVDLLLCCGDFQAVRNEGDMKCMAVPAKYRHMQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGVIRYKGVRIGGLSGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_DROME (Lariat debranching enzyme OS=Drosophila melanogaster GN=ldbr PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 2.597e-44 Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 + VEGC HGEL+ +Y T++ +E + KIDLLLCCGDFQ+ RN D++++ VP+KY +M SF+KYYSG+ VAP+ TIFIGGNHEASNYL EL YGGW APNIY+LG+AGVV +RI G+SGI+ Sbjct: 3 IAVEGCAHGELERIYDTIEGIEKVGGTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYYSGELVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNVNGVRIAGISGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_CHICK (Lariat debranching enzyme OS=Gallus gallus GN=DBR1 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.392e-44 Identity = 77/123 (62.60%), Postives = 101/123 (82.11%), Query Frame = 3 Query: 69 VEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 V GC HG LD +Y+TL+ ++ +N + DLLLCCGDFQAVRNE D+ + VP KYR M++F++YYSG++ AP+ T+FIGGNHEASN+L EL YGGW APNIY+LG+AGVV+F +RIGG+SGI+ Sbjct: 5 VAGCCHGALDKMYETLELLQRRHNVRPDLLLCCGDFQAVRNEADLRCMAVPAKYRHMQTFYRYYSGEKKAPVLTVFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGVVRFRGVRIGGISGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_MOUSE (Lariat debranching enzyme OS=Mus musculus GN=Dbr1 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 7.556e-44 Identity = 79/123 (64.23%), Postives = 98/123 (79.67%), Query Frame = 3 Query: 69 VEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 V GC HGELD +Y+TL E + +DLLLCCGDFQAVRNE D+ + VP KYR M++F++YYSG++ AP+ TIFIGGNHEASN+L EL YGGW APNIY+LG AGVVK+ +RIGG+SGI+ Sbjct: 5 VAGCCHGELDKIYETLALAERRGSGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRHMQTFYRYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGLAGVVKYRGVRIGGISGIF 127
BLAST of CF503891 vs. ExPASy Swiss-Prot
Match: DBR1_DROPS (Lariat debranching enzyme OS=Drosophila pseudoobscura pseudoobscura GN=DBR1 PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 1.289e-43 Identity = 77/125 (61.60%), Postives = 100/125 (80.00%), Query Frame = 3 Query: 63 LPVEGCMHGELDNVYKTLQYMENINNYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIY 437 + +EGC HGEL+ +Y T+ +E +N KIDLLLCCGDFQ+ RN D++++ VP+KY ++ +F+KYYSG+ VAP+ TIFIGGNHEASNYL EL YGGW APNIY+LG+AGVV +RI G+SGIY Sbjct: 3 IAIEGCAHGELERIYDTIACIEKESNTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDICTFYKYYSGECVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNVNGVRIAGISGIY 127 The following BLAST results are available for this feature:
BLAST of CF503891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503891 ID=CF503891; Name=CF503891; organism=Citrus sinensis; type=EST; length=441bpback to top |