CF503909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 7.855e-57 Identity = 109/175 (62.29%), Postives = 136/175 (77.71%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDKPLKKSVRETQEEVTRHWKRFVKGRR 525 KGSSQ+IAQYYQ IRLG+EGYKN+MENC NA LREGLEKTGRF I+SK++GVPLVAFSLKD+ H FEISE LR+FGWIVPAYTMP NA+++ VLRVV+REDFSR+L ERL+ IE+VL E+++LP+RV+ K A V G + KK+ E Q E+ WK+FV+ ++ Sbjct: 320 KGSSQVIAQYYQLIRLGYEGYKNVMENCQENASVLREGLEKTGRFNIISKEIGVPLVAFSLKDNRQHNEFEISETLRRFGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVRDIEKVLHELDTLPARVNAKLA-VAEEQAAANGSEVHKKTDSEVQLEMITAWKKFVEEKK 493
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.340e-56 Identity = 106/182 (58.24%), Postives = 139/182 (76.37%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHV-IPMVNETQGD--KPLKKSVRETQEEVTRHWKRFVKGRRAGAC 537 KGS QIIAQYYQ IRLGFEGYKN+M+NC+ NA+ L EG+ K GRF+I+SKDVGVP+VAFSL+DSS +TVFE+SE LR+FGWIVPAYTMP +AE++AVLRVV+REDFS SL ERL+S IE++L E+++ P R+ TK V V + +GD ETQ+++ +HW++ + +G C Sbjct: 321 KGSYQIIAQYYQLIRLGFEGYKNVMKNCLSNAKVLTEGITKMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHIAVLRVVIREDFSHSLAERLVSDIEKILSELDTQPPRLPTKAVRVTAEEVRDDKGDGLHHFHMDTVETQKDIIKHWRKIAGKKTSGVC 502
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.062e-53 Identity = 109/184 (59.24%), Postives = 138/184 (75.00%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDK---PLKKSVRETQEEVTRHWKRFVKGRR--AGAC 537 KGSSQ+IAQYYQ IRLG EGY+N+MENC N LREGLEKT RF I+SKD GVPLVAFSLKDSS HT FEIS+ LR++GWIVPAYTMP NA+++ VLRVV+REDFSR+L ERL+ IE+V++E++ LPSRV K + + +E+ D +KKS + Q ++ WK+FV R+ +G C Sbjct: 320 KGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKIS-LGQEKSESNSDNLMVTVKKSDIDKQRDIITGWKKFVADRKKTSGIC 502
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.811e-53 Identity = 109/181 (60.22%), Postives = 137/181 (75.69%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIESLPSRVSTKTAHVIPMVNETQGDKPLKKSVRETQEEVTRHWKRFVKGRRA--GAC 537 KGSSQIIAQYYQ IRLGFEGYKN+MENC+ N L+EG+EKT RF I+SKD GVP+VAFSLKD S H FEISE LR+FGWIVPAYTMPA+A+++ VLRVV+REDFSR+L ERL++ I +VL E+++LPS++S K I + E +K ++K E EV W++FVK R+ G C Sbjct: 319 KGSSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLKDHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVLHELDTLPSKISKKMG--IEGIAENVKEKKMEK---EILMEVIVGWRKFVKERKKMNGVC 494
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 47/122 (38.52%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 7 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVL 366 +SQ+I QYY F+R GF+GYK I E A L E +EKTG FEI++ +P+V + LK++S ++++++ L GW VPAY +P N EN + R+V+R DF ++ + ++E + Sbjct: 322 ASQLIGQYYNFVRYGFDGYKAIHERTHKVAMYLAEEIEKTGMFEIMNDGAQLPIVCYKLKENSNRGWNLYDLADRLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAI 443
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.711e-19 Identity = 46/125 (36.80%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 7 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEI 375 +SQ+I QYY F+R GF+GYK I E A L + +EKTG FEI++ +P+V + LK+ S ++++++ L GW VPAY +P N EN + R+V+R DF ++ + ++E ++ + Sbjct: 322 ASQLIGQYYNFVRYGFDGYKAIHERTHKVAMFLAKEIEKTGMFEIMNDGSQLPIVCYKLKEDSNRGWNLYDLADRLLMKGWQVPAYPLPKNLENEIIQRLVIRADFGMNMAFNYVQDMQEAIEAL 446
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.811e-19 Identity = 45/129 (34.88%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 381 + +S II QYY F+R GFEGY+ I + A+ L +E+TG F+I + +P+V + LKD + T++++++ L+ GW VPAY +P N EN+ + R V R D ++ E I + ++E+ + Sbjct: 318 RSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLADRLQMRGWQVPAYPLPKNLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNN 446
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCEB_LISMO (Glutamate decarboxylase beta OS=Listeria monocytogenes GN=gadB PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.448e-18 Identity = 44/129 (34.11%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES 381 + +S II QYY F+R GFEGY+ I + A+ L +E+TG F+I + +P+V + LKD + T++++++ L+ GW VPAY +P + EN+ + R V R D ++ E I + ++E+ + Sbjct: 318 RSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIFNDGSHLPIVCYKLKDDANVNWTLYDLADRLQMRGWQVPAYPLPKSLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNN 446
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.470e-18 Identity = 48/143 (33.57%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIES---LPSRVSTKTAH 414 + +SQII QYY F+R G+EGY+ I A L + + +TG FEI + +P+V + LKD + A T++++++ L+ GW VPAY +P N + R V R D +++V + + E ++E+ + L V+T H Sbjct: 316 RSASQIIGQYYNFLRFGYEGYRQIHMRTRDGALQLSQAVAETGLFEIYNDGANLPIVCYKLKDDANVAWTLYDLADRLQMKGWQVPAYPLPKEMGNTIIQRYVCRGDLGQNMVTAFKNDLSESIEELNNAHILYHDVNTSKTH 458
BLAST of CF503909 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.226e-18 Identity = 46/128 (35.94%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 1 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD--SSAHTVFEISEGLRKFGWIVPAYTMPANAENVAVLRVVVREDFSRSLVERLISHIEEVLKEIE 378 + +SQII QYY F+R GFEGY+ I E A L + +EK+G FEI++ +P+V + LKD T++++++ L GW VPAY +PA+ + + R V R D ++ E + + L +E Sbjct: 321 RSASQIIGQYYNFLRYGFEGYREIHEKTKKTALYLSKTVEKSGYFEIINDGSNLPIVCYKLKDDLDVEWTLYDLADQLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAADFADALHNLE 448 The following BLAST results are available for this feature:
BLAST of CF503909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503909 ID=CF503909; Name=CF503909; organism=Citrus sinensis; type=EST; length=540bpback to top |