CF503916

Overview
NameCF503916
Unique NameCF503916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length215
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS_SOLLC (Nicotianamine synthase OS=Solanum lycopersicum GN=CHLN PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.103e-22
Identity = 47/71 (66.20%), Postives = 61/71 (85.92%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTK 213
            LCQ +Q+IRS LI+LCG+AEGLLESHFS IL+S+ENP+ +L+IFPY+ NYIKLS LE+NILT++ +  P K
Sbjct:   54 LCQKIQEIRSHLIKLCGQAEGLLESHFSKILSSYENPLQHLHIFPYFDNYIKLSLLEYNILTKNTTNIPKK 124          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS1_ARATH (Nicotianamine synthase 1 OS=Arabidopsis thaliana GN=NAS1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.299e-20
Identity = 44/74 (59.46%), Postives = 60/74 (81.08%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFE---NPIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTK 213
            +C+ V+D+R+ LI+LCGEAEG LE HFS+IL S +   NP+ +L+IFPYYSNY+KL +LEF++L+QH S  PTK
Sbjct:   54 MCEEVKDMRANLIKLCGEAEGYLEQHFSTILGSLQEDQNPLDHLHIFPYYSNYLKLGKLEFDLLSQHSSHVPTK 127          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS2_ARATH (Nicotianamine synthase 2 OS=Arabidopsis thaliana GN=NAS2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.690e-20
Identity = 44/70 (62.86%), Postives = 59/70 (84.29%), Query Frame = 1
Query:    7 QSVQDIRSKLIRLCGEAEGLLESHFSSILASFE-NPIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTK 213
            + V+D+RS LI+LCGEAEG LE HFS+IL SFE NP+ +L+IFPYY+NY+KL +LEF++L+QH +  PTK
Sbjct:   57 EKVKDMRSHLIKLCGEAEGYLEQHFSAILGSFEDNPLNHLHIFPYYNNYLKLGKLEFDLLSQHTTHVPTK 126          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS4_ARATH (Probable nicotianamine synthase 4 OS=Arabidopsis thaliana GN=NAS4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.648e-18
Identity = 41/69 (59.42%), Postives = 59/69 (85.51%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFE-NPIANLNIFPYYSNYIKLSQLEFNILTQHCSRF 204
            + +++Q++RS LI++CGEAEG LE HFSSIL SFE NP+ +LN+FPYY+NY+KLS+LEF++L Q+ + F
Sbjct:   55 MSENIQEMRSNLIKICGEAEGYLEHHFSSILTSFEDNPLHHLNLFPYYNNYLKLSKLEFDLLEQNLNGF 123          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS3_ARATH (Nicotianamine synthase 3 OS=Arabidopsis thaliana GN=NAS3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.380e-17
Identity = 41/72 (56.94%), Postives = 57/72 (79.17%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFE-NPIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTK 213
            +C  VQ+IR  LI++CG AEG LE+HFSSIL S++ NP+ +LNIFPYY+NY+KL +LEF++L Q+ + F  K
Sbjct:   54 MCDRVQEIRLNLIKICGLAEGHLENHFSSILTSYQDNPLHHLNIFPYYNNYLKLGKLEFDLLEQNLNGFVPK 125          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS3_HORVU (Probable nicotianamine synthase 3 OS=Hordeum vulgare GN=NAS3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 9.997e-16
Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = 1
Query:   16 QDIRSKLIRLCGEAEGLLESHFSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQHCSR 201
            Q++R  LIRLC EAEG LE+H+S +LA+F+NP+ +L IFPYYSNYI LS+LE+ +L ++  R
Sbjct:   63 QEMREGLIRLCSEAEGKLEAHYSDMLAAFDNPLDHLGIFPYYSNYINLSKLEYELLARYVRR 124          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS8_HORVU (Nicotianamine synthase 8 OS=Hordeum vulgare GN=NAS8 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.799e-15
Identity = 35/64 (54.69%), Postives = 50/64 (78.12%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQH 192
            L    Q++R  LIRLC EAEG LE+H+S +LA+F+NP+ +L +FPYYSNYI LS+LE+ +L ++
Sbjct:   56 LGSEAQEMREGLIRLCSEAEGKLEAHYSDMLAAFDNPLDHLGMFPYYSNYINLSKLEYELLARY 119          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS7_HORVU (Probable nicotianamine synthase 7 OS=Hordeum vulgare GN=NAS7 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.799e-15
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQH 192
            L    Q +R  LIRLC EAEG LE+H+S +LA+F+NP+ +L +FPYYSNYI LS+LE+ +L ++
Sbjct:   56 LAPEAQAMREGLIRLCSEAEGKLEAHYSDMLAAFDNPLDHLGVFPYYSNYINLSKLEYELLARY 119          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS6_HORVU (Probable nicotianamine synthase 6 OS=Hordeum vulgare GN=NAS6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.799e-15
Identity = 35/64 (54.69%), Postives = 50/64 (78.12%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQH 192
            L    Q++R  LIRLC EAEG LE+H+S +LA+F+NP+ +L +FPYYSNYI LS+LE+ +L ++
Sbjct:   56 LGSEAQEMREGLIRLCSEAEGKLEAHYSDMLAAFDNPLDHLGMFPYYSNYINLSKLEYELLARY 119          
BLAST of CF503916 vs. ExPASy Swiss-Prot
Match: NAS4_HORVU (Probable nicotianamine synthase 4 OS=Hordeum vulgare GN=NAS4 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.799e-15
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1
Query:    1 LCQSVQDIRSKLIRLCGEAEGLLESHFSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQH 192
            L    Q +R  LIRLC EAEG LE+H+S +LA+F+NP+ +L +FPYYSNYI LS+LE+ +L ++
Sbjct:   56 LAPEAQAMREGLIRLCSEAEGKLEAHYSDMLAAFDNPLDHLGVFPYYSNYINLSKLEYELLARY 119          
The following BLAST results are available for this feature:
BLAST of CF503916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAS_SOLLC1.103e-2266.20Nicotianamine synthase OS=Solanum lycopersicum GN=... [more]
NAS1_ARATH2.299e-2059.46Nicotianamine synthase 1 OS=Arabidopsis thaliana G... [more]
NAS2_ARATH6.690e-2062.86Nicotianamine synthase 2 OS=Arabidopsis thaliana G... [more]
NAS4_ARATH1.648e-1859.42Probable nicotianamine synthase 4 OS=Arabidopsis t... [more]
NAS3_ARATH2.380e-1756.94Nicotianamine synthase 3 OS=Arabidopsis thaliana G... [more]
NAS3_HORVU9.997e-1658.06Probable nicotianamine synthase 3 OS=Hordeum vulga... [more]
NAS8_HORVU3.799e-1554.69Nicotianamine synthase 8 OS=Hordeum vulgare GN=NAS... [more]
NAS7_HORVU3.799e-1554.69Probable nicotianamine synthase 7 OS=Hordeum vulga... [more]
NAS6_HORVU3.799e-1554.69Probable nicotianamine synthase 6 OS=Hordeum vulga... [more]
NAS4_HORVU3.799e-1554.69Probable nicotianamine synthase 4 OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-404 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503916 ID=CF503916; Name=CF503916; organism=Citrus sinensis; type=EST; length=215bp
CTTTGCCAAAGCGTTCAAGACATTAGGTCTAAGCTCATTAGACTTTGTGG
TGAAGCTGAGGGCCTTTTGGAATCCCACTTCTCTTCTATCCTAGCTTCAT
TTGAAAACCCTATTGCCAATCTCAATATTTTCCCTTACTATTCAAACTAC
ATCAAGCTTAGCCAACTTGAGTTCAACATCCTTACCCAACATTGCTCTCG
CTTCCCTACCAAAAT
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