CF503931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS272_ARATH (40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 6.446e-37 Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 2 Query: 53 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 307 VLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ++LCQPTGG+A+LTEGCSFRRKGD Sbjct: 2 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS27_HORVU (40S ribosomal protein S27 OS=Hordeum vulgare GN=RPS27 PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 9.308e-36 Identity = 71/85 (83.53%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 53 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 307 VLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC CQ+VLCQPTGG+ARLTEGCSFRRKGD Sbjct: 2 VLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKGD 86
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS271_ARATH (40S ribosomal protein S27-1 OS=Arabidopsis thaliana GN=RPS27A PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.671e-34 Identity = 66/83 (79.52%), Postives = 72/83 (86.75%), Query Frame = 2 Query: 53 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 301 VLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQ++LC PTGG+A+LTEGCSFR+K Sbjct: 2 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS273_ARATH (40S ribosomal protein S27-3 OS=Arabidopsis thaliana GN=RPS27D PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 8.712e-34 Identity = 67/83 (80.72%), Postives = 71/83 (85.54%), Query Frame = 2 Query: 53 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 301 VLQNDIDLL+PP RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ+VLCQPTGG+ARL EGCSFR+K Sbjct: 2 VLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS27_CHLRE (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii GN=RPS27 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.065e-31 Identity = 65/85 (76.47%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 53 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 307 VL +DIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C SVLC PTG RLTEGCSFRRK D Sbjct: 2 VLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRKSD 86
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS27_SCHPO (40S ribosomal protein S27 OS=Schizosaccharomyces pombe GN=rps27 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.047e-27 Identity = 55/78 (70.51%), Postives = 61/78 (78.21%), Query Frame = 2 Query: 68 IDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 301 +DLLNP +LVQ P SFFMDVKC GCFNITTVFSH+QTVV+CG+C SVLCQPTGG+ARL EGCSFRRK Sbjct: 5 VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS27_XENLA (40S ribosomal protein S27 OS=Xenopus laevis GN=rps27 PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.945e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 71 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 301 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS27_RAT (40S ribosomal protein S27 OS=Rattus norvegicus GN=Rps27 PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.945e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 71 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 301 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS27_MOUSE (40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.945e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 71 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 301 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CF503931 vs. ExPASy Swiss-Prot
Match: RS27_HUMAN (40S ribosomal protein S27 OS=Homo sapiens GN=RPS27 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.945e-25 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 71 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 301 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82 The following BLAST results are available for this feature:
BLAST of CF503931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503931 ID=CF503931; Name=CF503931; organism=Citrus sinensis; type=EST; length=525bpback to top |