CF503979

Overview
NameCF503979
Unique NameCF503979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3096 contig Csv1_Contig3096:711..1437. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.515e-108
Identity = 190/209 (90.91%), Postives = 203/209 (97.13%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            VS+PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLA+NNV+ EGILLKPSMVTPGAEHK KASPET+A +TLTMLKRRVPPAVPGIMFLSGGQSE EATLNLNAMNQ+PNPWHVSFSYARALQN+VL+TWQG+PE  EA+QK+LLVRAKANSLAQLGKYSAEGE+E+AKKGMFVKGYTY
Sbjct:  183 VSVPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQLGKYSAEGENEDAKKGMFVKGYTY 391          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 5.087e-99
Identity = 177/209 (84.69%), Postives = 193/209 (92.34%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            VSIP GPSALAVKEAAWGLARYAAISQD+GLVPIVEPEILLDG+H I+RT +VAEKVW+EVFFYLA+NNV+ EGILLKPSMVTPGAE K++A+PE +A YTL +L+ RVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNT LKTW GRPEN  AAQ +LL RAKANSLAQLGKY+ EGESEEAK+GMFVKGYTY
Sbjct:  190 VSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 398          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 4.031e-96
Identity = 172/209 (82.30%), Postives = 191/209 (91.39%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            VSIP GPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDG+H I+RT EVA+KVW+EVF+YLAENNV  EGILLKPSMVTPGAE K+KASP  +A+YTL +L RR+PPAVPGIMFLSGGQSEVEATLNLNAMN++PNPWHVSFSYARALQNT LKTW G PEN +AAQ++LL RAK+NSLAQLGKY  +GESEEAKK +FVKGY+Y
Sbjct:  148 VSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELFVKGYSY 356          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 350.517 bits (898), Expect = 5.264e-96
Identity = 171/209 (81.82%), Postives = 191/209 (91.39%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            VSIP GPSALAVKEAAWGLARYAAISQD+GLVPIVEPEI+LDG+H I+RT +VAEKVW+EVFFYLA+NNV+ EGILLKPSMVTPGAE  ++A+PE +A YTL +L+ R+PPAVPGIMFLSGGQSE+EATLNLNAMNQAPNPWHVSFSYARALQNT LKTW G+ EN +AAQ  LL RAKANSLAQLGKY+ EGESEEAK+GMFVKGYTY
Sbjct:  191 VSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGESEEAKEGMFVKGYTY 399          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 2.889e-94
Identity = 167/209 (79.90%), Postives = 189/209 (90.43%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            VSIP GPS LAVKEAAWGLARYAAISQDNGLVPIVEPEILLDG+H I+RT EVA+KVW+E FFY+AENNV+ EGILLKPSMVTPGAE K++A+PE ++ YTL +L RR+PPAVPGIMFLSGGQSEVEAT NLNAMNQ PNPWHVSFSYARALQNT LKTW G+PEN +AAQ +LL+RAKANSLAQLGKY+++GE+ EAK+GMFVK Y Y
Sbjct:  180 VSIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAEAKEGMFVKNYVY 388          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 339.732 bits (870), Expect = 9.293e-93
Identity = 169/209 (80.86%), Postives = 188/209 (89.95%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            VSIP GPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDG+H I+RT EVA+KVW+EVF+YLAENNV  EGILLKPSMVTPGAE K+KASP  +A+YTL +L RR+PPAVPGIMFLSGGQSEVEATLNLNAMN++PNPWHVSFSYARALQNT LKTW G PEN +AAQ++LL RAK+NSLAQLGKY  +GESEEAKK    +GY+Y
Sbjct:  142 VSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC-CQGYSY 349          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 286.96 bits (733), Expect = 7.148e-77
Identity = 149/205 (72.68%), Postives = 164/205 (80.00%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVK 615
            VSIP GPSALAVKEAAWGLARYAAI+QDNGL PI+EPEI+LDG+H I+RT  VA++VW+EVFF LAENNV+LEG  LKPSMV PGA    K  PE +A Y L +L RR  P VPGIM LSGGQSEVEATLNLNAMNQ+PNPWHVSFSYARALQNT LKTW    EN +A        AK+NSLAQLGKY+ EGESEE KK MFVK
Sbjct:  188 VSIPNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVKAQD---FACAKSNSLAQLGKYTGEGESEERKKDMFVK 389          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.480e-70
Identity = 136/209 (65.07%), Postives = 163/209 (77.99%), Query Frame = 1
Query:    1 VSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            VSIP GPS + +   A+GLARYAAI+Q+ GLVPIVEPE+LLDG+H I+R LEV E +W+E F Y+A+N V+L+GILLKP+MVTPGA+ K KA P  +A+YTL ML  R PP VPGIMFLSGGQSE+E+TLNLNAMNQ+PNPWHVSFSYARAL NTVLKTWQ  P   +A + +   R KANS AQ GKY A  E +EA +GM+ KG  Y
Sbjct:  167 VSIPHGPSIM-LPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTEGKEAAQGMYEKGKGY 372          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.722e-59
Identity = 116/204 (56.86%), Postives = 151/204 (74.02%), Query Frame = 1
Query:   19 PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN-PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            PS L++ E A  LARYAAI Q+NGLVPIVEPEIL+DG+H +E++ EV EKV + VF  L +++++LEG LLKP+MV  G +   KA+ E I K+T+  L+R VPPA+ G++FLSGGQ+E+EAT NLNAMN  PN PW +SFSY RALQ +V+ TW+G   N EAA+K  L RAK NSLAQLGKY+ E  +  A + ++VK Y Y
Sbjct:  154 PSQLSITENAHTLARYAAICQENGLVPIVEPEILMDGNHTVEQSAEVTEKVLAAVFKALNDHHILLEGALLKPNMVVNGTDCPIKATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNRPWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTGSASESLYVKDYKY 357          
BLAST of CF503979 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.268e-57
Identity = 118/208 (56.73%), Postives = 146/208 (70.19%), Query Frame = 1
Query:   10 PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 627
            P  PS LA+ E A GLARY  I Q+NGLVPIVEPEIL+DG H I+R  EV+E+V +  +  L +++V+LEG  LKP++VTPG+E K K +PE IA+YT+  L+R VP AVPG+MFLSGGQSE EATLNLNAMN  +   PW +SFSY RALQ + LK WQG+ EN   AQ+  L RAK NS A LGKY       +A + + VK Y Y
Sbjct:  151 PTEPSPLAILENANGLARYGIICQENGLVPIVEPEILVDGTHDIDRCAEVSERVLAACYKALNDHHVLLEGTSLKPNIVTPGSESK-KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357          
The following BLAST results are available for this feature:
BLAST of CF503979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC3_ARATH3.515e-10890.91Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC2_ARATH5.087e-9984.69Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA4.031e-9682.30Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC1_ARATH5.264e-9681.82Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC_ORYSJ2.889e-9479.90Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_PEA9.293e-9380.86Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_SPIOL7.148e-7772.68Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE6.480e-7065.07Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_DICDI6.722e-5956.86Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_SPIOL1.268e-5756.73Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-467 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503979 ID=CF503979; Name=CF503979; organism=Citrus sinensis; type=EST; length=725bp
GTTAGCATTCCATGTGGTCCTTCTGCTCTGGCTGTGAAGGAAGCTGCATG
GGGCCTTGCACGATATGCTGCTATTTCTCAGGATAATGGACTTGTGCCTA
TAGTGGAACCCGAGATCCTTCTTGATGGGGACCACCCAATTGAGAGGACC
CTTGAAGTGGCAGAAAAGGTCTGGTCAGAAGTCTTTTTCTACTTGGCAGA
AAACAATGTCGTTCTTGAGGGAATTCTACTTAAACCCAGCATGGTCACGC
CAGGTGCTGAACACAAGGAGAAGGCCTCTCCAGAGACCATTGCTAAATAT
ACACTTACAATGCTCAAGAGGAGAGTACCCCCTGCAGTCCCAGGAATCAT
GTTTTTGTCTGGAGGACAATCAGAAGTGGAAGCAACATTGAACTTGAATG
CGATGAACCAAGCCCCCAACCCCTGGCACGTGTCCTTTTCTTATGCCCGT
GCACTTCAGAACACTGTTCTTAAGACATGGCAAGGTCGTCCTGAGAATAC
TGAAGCTGCACAAAAGTCACTATTGGTGCGTGCAAAGGCAAATTCCTTGG
CGCAGCTTGGGAAGTACTCCGCAGAAGGTGAAAGCGAGGAAGCCAAGAAA
GGAATGTTTGTCAAGGGCTACACTTACTAAGCCAATAATATACTATGCAG
TTTGAGCCTGCCTGAGCAACTCATGACACTTGTGTCATTGCGCACTTGCT
TTGTTTTGGTTCCTTCCCTTTTTAA
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