CF504016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PECCP (Bifunctional polymyxin resistance protein arnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.523e-14 Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A GA+NGL FT+ RPFNW+GPR+D Sbjct: 452 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLD 505
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_ERWCT (Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica GN=arnA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.523e-14 Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A GA+NGL FT+ RPFNW+GPR+D Sbjct: 453 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLD 506
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.586e-14 Identity = 31/54 (57.41%), Postives = 44/54 (81.48%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED+S + G I KQRW Y+ +KQL++R+I+A G +NGL+FT+ RPFNW+GPR+D Sbjct: 446 EDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SODGM (Bifunctional polymyxin resistance protein arnA OS=Sodalis glossinidius (strain morsitans) GN=arnA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.252e-13 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 3 Query: 3 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 +I ST EVYG + DP V ED S I G I KQRW Y+ +KQL++R+++A G + GL FT+ RPFNW+GPR+D Sbjct: 427 IIFPSTSEVYG------------MCTDP---VFDEDDSSLIVGPINKQRWIYSVSKQLLDRVLWAYGEKEGLRFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.635e-13 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D Sbjct: 446 EDHSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_PROMH (Bifunctional polymyxin resistance protein arnA OS=Proteus mirabilis (strain HI4320) GN=arnA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.635e-13 Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D Sbjct: 446 EDNSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPY (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPS (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis GN=arnA PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPP (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis (strain Pestoides F) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499
BLAST of CF504016 vs. ExPASy Swiss-Prot
Match: ARNA_YERPN (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=arnA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.789e-13 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 105 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 266 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD 499 The following BLAST results are available for this feature:
BLAST of CF504016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504016 ID=CF504016; Name=CF504016; organism=Citrus sinensis; type=EST; length=323bpback to top |