CF504071

Overview
NameCF504071
Unique NameCF504071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:1005..1455. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 7.312e-61
Identity = 117/149 (78.52%), Postives = 124/149 (83.22%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            QNYGEKVLIQFEDFANHNAF+LLAKYGTTHL FNDDIQ                   TLA+H+FLFLGAGEAGTGIAELIALE+SKQTK P+EETRKKI LVDSKGLIV SRKDSLQ FKKPWAHEHEPV +LLDAVKVIKPT+LIGSS
Sbjct:  271 QNYGEKVLIQFEDFANHNAFDLLAKYGTTHLAFNDDIQGTASVVLAGIVSALRLLGGTLADHKFLFLGAGEAGTGIAELIALEMSKQTKCPIEETRKKIWLVDSKGLIVGSRKDSLQQFKKPWAHEHEPVKDLLDAVKVIKPTVLIGSS 419          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.167e-58
Identity = 114/149 (76.51%), Postives = 121/149 (81.21%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            QNYGEKVLIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+H+FLFLGAGEAGTGIAELIALEISKQT AP+EETRKKI LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDAVK IKPT+LIGSS
Sbjct:  327 QNYGEKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLAGLISALKLVGGSLADHKFLFLGAGEAGTGIAELIALEISKQTNAPLEETRKKIWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNKFLDAVKAIKPTVLIGSS 475          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.876e-57
Identity = 111/149 (74.50%), Postives = 121/149 (81.21%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            QNYGEKVL+QFEDFANHNAF+LL KY ++HLVFNDDIQ                   TLA+H FLFLGAGEAGTGIAELIA+E+SKQTKAPVEETRKKI LVDSKGLIVSSR +SLQ FKKPWAHEHEPV  LL+AVK IKPT+LIGSS
Sbjct:  269 QNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIAVEVSKQTKAPVEETRKKIWLVDSKGLIVSSRLESLQQFKKPWAHEHEPVKGLLEAVKAIKPTVLIGSS 417          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 6.406e-57
Identity = 109/149 (73.15%), Postives = 121/149 (81.21%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            QNYGEKVLIQFEDFANHNAF+LLAKYGTTHLVFNDDIQ                   +LA+H FLFLGAGEAGTGIAELIALE+S+++K P+EETRKKI L DSKGLIVSSRK+SLQHFKKPWAHEHEPV  LL+ VK IKP +LIG+S
Sbjct:  271 QNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQGTAAVVLAGLISALKLLGGSLADHTFLFLGAGEAGTGIAELIALEMSRRSKTPLEETRKKIWLTDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLLEVVKAIKPIVLIGTS 419          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 5.423e-56
Identity = 106/149 (71.14%), Postives = 121/149 (81.21%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            QNYGEK+L+QFEDFANHNAFELL KY TTHLVFNDDIQ                   TLA+H+FLFLGAGEAGTGIAELIALE+SK+TKAPVE+ RKKI LVDSKGL+VSSRK++LQ FK PWAHEHEP+  L+DAV+ IKPT+LIG+S
Sbjct:  265 QNYGEKILVQFEDFANHNAFELLEKYRTTHLVFNDDIQGTASVVLAGLIASLKLLGGTLADHKFLFLGAGEAGTGIAELIALEMSKKTKAPVEQMRKKIWLVDSKGLVVSSRKETLQQFKLPWAHEHEPITTLIDAVQAIKPTVLIGTS 413          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 1.578e-55
Identity = 109/149 (73.15%), Postives = 120/149 (80.54%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            Q YGEKVLIQFEDFANHNAF+LLAKY  +HLVFNDDIQ                   TLAEH +LFLGAGEAGTGIAELIALEISKQTKAP+EE RKK+ L+DSKGLIV+SRK+SLQ FKKPWAHEHEPV  LLDAV+ IKPT+LIG+S
Sbjct:  319 QIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTGIAELIALEISKQTKAPIEECRKKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTS 467          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.515e-55
Identity = 107/149 (71.81%), Postives = 119/149 (79.87%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            QNYGEKVLIQFEDFANHNAF LLAKYGT+HLVFNDDIQ                   +L+EH FLFLGAGEAGTGIAELIALE+SKQT  P+EETRKKI +VDSKGLIV SR + LQHFK+PWAH+HEPV  L++AVK IKPT+LIGSS
Sbjct:  254 QNYGEKVLIQFEDFANHNAFNLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSS 402          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 3.515e-55
Identity = 106/149 (71.14%), Postives = 118/149 (79.19%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            QNYGE +LIQFEDFANHNAF+LL KY TTHLVFNDDIQ                   +LA+ +FLFLGAGEAGTGIAELIALEISKQT  P+EE+RKK+ LVDSKGLIV SR DSLQHFKKPWAH+HEPVN  LDA+K I+PT+LIGSS
Sbjct:  328 QNYGENLLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQGTASVVLGGLISALKLVGGSLADQKFLFLGAGEAGTGIAELIALEISKQTNIPLEESRKKVWLVDSKGLIVRSRLDSLQHFKKPWAHDHEPVNEFLDAIKTIRPTVLIGSS 476          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.133e-52
Identity = 105/149 (70.47%), Postives = 114/149 (76.51%), Query Frame = 3
Query:    3 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS 449
            Q YGEKVLIQFEDFANHNAF+LL KY  +HLVFNDDIQ                   TLAE  +LFLGAGEAGTGIAELIALEISKQT AP+EE RKK+ LVDSKGLIV SRK SLQ FKKPWAHEHEP+  L DAV+ IKPT+LIG+S
Sbjct:  316 QFYGEKVLIQFEDFANHNAFDLLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGIAELIALEISKQTNAPIEECRKKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIKPTVLIGTS 464          
BLAST of CF504071 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.848e-26
Identity = 71/145 (48.97%), Postives = 84/145 (57.93%), Query Frame = 3
Query:    9 YGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG 443
            YG   LIQFEDFAN NAF LL KY   +  FNDDIQ                    L++H  LF GAGEA  GIA LI + + K+  +  EE  K+I +VDSKGLIV  R  SL   K+ +AHEH  + NL D VK IKPT+LIG
Sbjct:  225 YGMNCLIQFEDFANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSK-EEAIKRIWMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIG 367          
The following BLAST results are available for this feature:
BLAST of CF504071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
MAOX_VITVI7.312e-6178.52NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR1.167e-5876.51NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU2.876e-5774.50NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOX_POPTR6.406e-5773.15NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_MESCR5.423e-5671.14NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_ORYSJ1.578e-5573.15NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_SOLLC3.515e-5571.81NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_FLATR3.515e-5571.14NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_MAIZE2.133e-5270.47NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_COLLI5.848e-2648.97NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-559 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-13_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504071 ID=CF504071; Name=CF504071; organism=Citrus sinensis; type=EST; length=451bp
AGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGATTTCGCAAAC
CACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCATCTTGTCTT
CAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTGGGGTAGTTG
CAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGATTTTTGTTT
CTTGGAGCTGGGGAGGCTGGGACTGGTATAGCTGAACTTATTGCGCTTGA
GATATCAAAGCAGACTAAAGCTCCTGTGGAAGAGACCCGGAAGAAGATAT
GTCTTGTAGACTCAAAGGGACTGATAGTCAGCTCCCGGAAAGATTCACTT
CAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTCAACAATCT
CTTAGATGCTGTCAAGGTAATCAAGCCAACAATTTTGATTGGATCATCTG
G
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