CF504184

Overview
NameCF504184
Unique NameCF504184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2201 contig Csv1_Contig2201:222..743. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR1_ARATH (Soluble inorganic pyrophosphatase 1, chloroplastic OS=Arabidopsis thaliana GN=PPA1 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 8.147e-79
Identity = 123/147 (83.67%), Postives = 133/147 (90.48%), Query Frame = 1
Query:    4 FSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            FSC AIYNPQV++ EEG  E+LDYRVFF++ SGKKVSPWHDIPL LGDGVFNF+VEIPKES AKMEVATDE +TPIKQD KKGKLRYYPYNINWNYGL PQTWEDPS ANSEVEG FGDNDPVDVVEIGE +RKIG+ILK+KPL AL
Sbjct:   55 FSCSAIYNPQVKVQEEGPAESLDYRVFFLDGSGKKVSPWHDIPLTLGDGVFNFIVEIPKESKAKMEVATDEDFTPIKQDTKKGKLRYYPYNINWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQRKIGDILKIKPLAAL 201          

HSP 2 Score: 49.6766 bits (117), Expect = 8.147e-79
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 3
Query:  432 LGCLTMIDEGELDWKIVAISLDDPKA 509
            L  L MIDEGELDWKIVAISLDDPKA
Sbjct:  198 LAALAMIDEGELDWKIVAISLDDPKA 223          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR1_CHLRE (Soluble inorganic pyrophosphatase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ppa1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.142e-53
Identity = 84/135 (62.22%), Postives = 104/135 (77.04%), Query Frame = 1
Query:   40 ITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            + E+G  ++L+YR+FF     K+VS WH+IPL  GDG  +++ EIPKE+SAKMEVATDE  TPIKQD+KKGKLR+YPYNINWNYG+ PQTWEDP   ++ + GA GDNDPVDVVEIG    K G + KVKP+G L
Sbjct:   48 VEEKGPKDSLEYRMFF-KQGAKEVSCWHEIPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRFYPYNINWNYGMLPQTWEDPGHTDATL-GAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVL 180          

HSP 2 Score: 50.447 bits (119), Expect = 4.142e-53
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 3
Query:  432 LGCLTMIDEGELDWKIVAISLDDPKAAPC 518
            +G L MID+GELDWK++AIS DDPKAA C
Sbjct:  177 VGVLAMIDDGELDWKVIAISADDPKAALC 205          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR_MOUSE (Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.988e-42
Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = 1
Query:   46 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            E   P TL+YRVF  N  G+ +SP+HD+P+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP  ++    G  GDNDP+DV EIG +    GEI++VK LG L
Sbjct:    8 ERAAPFTLEYRVFLKNEKGQYISPFHDVPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHSDKHT-GCCGDNDPIDVCEIGSKVCARGEIIRVKVLGIL 144          

HSP 2 Score: 46.595 bits (109), Expect = 5.988e-42
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 3
Query:  426 EALGCLTMIDEGELDWKIVAISLDDPKAAPCK 521
            + LG L MIDEGE DWK++AI++DDP AA  K
Sbjct:  139 KVLGILAMIDEGETDWKVIAINVDDPDAANYK 170          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR_BOVIN (Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.726e-41
Identity = 74/138 (53.62%), Postives = 92/138 (66.67%), Query Frame = 1
Query:   46 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            E   P TL+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI++VK LG L
Sbjct:    8 ERAAPFTLEYRVFLKNEKGQYISPFHDIPIYADKEVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGIL 144          

HSP 2 Score: 44.669 bits (104), Expect = 1.726e-41
Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  426 EALGCLTMIDEGELDWKIVAISLDDPKAA 512
            + LG L MIDEGE DWK++AI+++DP AA
Sbjct:  139 KVLGILAMIDEGETDWKVIAINVEDPDAA 167          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR_MACFA (Inorganic pyrophosphatase OS=Macaca fascicularis GN=PPA1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.819e-41
Identity = 73/138 (52.90%), Postives = 91/138 (65.94%), Query Frame = 1
Query:   46 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            E   P +L+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ VK LG L
Sbjct:    8 ERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGIL 144          

HSP 2 Score: 46.2098 bits (108), Expect = 3.819e-41
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  426 EALGCLTMIDEGELDWKIVAISLDDPKAA 512
            + LG L MIDEGE DWK++AI++DDP AA
Sbjct:  139 KVLGILAMIDEGETDWKVIAINVDDPDAA 167          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR_HUMAN (Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.819e-41
Identity = 73/138 (52.90%), Postives = 91/138 (65.94%), Query Frame = 1
Query:   46 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            E   P +L+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KKGKLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ VK LG L
Sbjct:    8 ERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGIL 144          

HSP 2 Score: 46.2098 bits (108), Expect = 3.819e-41
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  426 EALGCLTMIDEGELDWKIVAISLDDPKAA 512
            + LG L MIDEGE DWK++AI++DDP AA
Sbjct:  139 KVLGILAMIDEGETDWKVIAINVDDPDAA 167          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR_PONAB (Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.435e-40
Identity = 72/138 (52.17%), Postives = 90/138 (65.22%), Query Frame = 1
Query:   46 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            E   P +L+YRVF  N  G+ +SP+HDIP+     VF+ VVE+P+ S+AKME+AT +   PIKQD+KK KLRY    +PY    WNYG  PQTWEDP   N +  G  GDNDP+DV EIG +    GEI+ VK LG L
Sbjct:    8 ERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKRKLRYVANLFPYKGYIWNYGAIPQTWEDPGH-NDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGIL 144          

HSP 2 Score: 46.595 bits (109), Expect = 2.435e-40
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 3
Query:  426 EALGCLTMIDEGELDWKIVAISLDDPKAA 512
            + LG L MIDEGE DWK++AI++DDP AA
Sbjct:  139 KVLGILAMIDEGETDWKVIAINMDDPDAA 167          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR2_HUMAN (Inorganic pyrophosphatase 2, mitochondrial OS=Homo sapiens GN=PPA2 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 1.957e-36
Identity = 71/155 (45.81%), Postives = 93/155 (60.00%), Query Frame = 1
Query:   46 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG-----------------DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            E GQP + +YR+FF N +G  +SP+HDIPL++                  + +FN +VEIP+ ++AKME+AT E   PIKQ +K GKLRY    +PY    WNYG  PQTWEDP     +    FGDNDP+DV EIG +    GE++ VK LG L
Sbjct:   39 ERGQPCSQNYRLFFKNVTGHYISPFHDIPLKVNSKEENGIPMKKARNDEYENLFNMIVEIPRWTNAKMEIATKEPMNPIKQYVKDGKLRYVANIFPYKGYIWNYGTLPQTWEDP-HEKDKSTNCFGDNDPIDVCEIGSKILSCGEVIHVKILGIL 192          

HSP 2 Score: 41.2022 bits (95), Expect = 1.957e-36
Identity = 16/27 (59.26%), Postives = 23/27 (85.19%), Query Frame = 3
Query:  432 LGCLTMIDEGELDWKIVAISLDDPKAA 512
            LG L +IDEGE DWK++AI+ +DP+A+
Sbjct:  189 LGILALIDEGETDWKLIAINANDPEAS 215          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR2_MOUSE (Inorganic pyrophosphatase 2, mitochondrial OS=Mus musculus GN=Ppa2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.623e-35
Identity = 72/157 (45.86%), Postives = 93/157 (59.24%), Query Frame = 1
Query:   43 TEE-GQPETLDYRVFFVNNSGKKVSPWHDIPLQLG-----------------DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYP-----YNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            TEE G P + DYR+FF + +G  +SP+HDIPL+                   + +FN VVEIP+ ++AKME+AT+E   PIKQDIK GKLRY P         WNYG  PQTWEDP   +   +   GDNDP+DV EIG +    G+++ VK LG L
Sbjct:   32 TEELGHPRSQDYRLFFKHVAGHYISPFHDIPLKADCKEEHDIPRKKARNDEYENLFNMVVEIPRWTNAKMEIATEEPLNPIKQDIKNGKLRYTPNIFPHKGYIWNYGALPQTWEDPHLRDKSTD-CCGDNDPIDVCEIGSKVLSRGDVVHVKILGTL 187          

HSP 2 Score: 38.891 bits (89), Expect = 1.623e-35
Identity = 15/26 (57.69%), Postives = 22/26 (84.62%), Query Frame = 3
Query:  432 LGCLTMIDEGELDWKIVAISLDDPKA 509
            LG L +ID+ E DWKI+AI+++DP+A
Sbjct:  184 LGTLALIDQSETDWKIIAINVNDPEA 209          
BLAST of CF504184 vs. ExPASy Swiss-Prot
Match: IPYR_ASHGO (Inorganic pyrophosphatase OS=Ashbya gossypii GN=IPP1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.757e-35
Identity = 71/138 (51.45%), Postives = 95/138 (68.84%), Query Frame = 1
Query:   52 GQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDG--VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILKVKPLGAL 444
            G   TLDYRVF +  +GK VSP+HDIPL   +   +FN VVEIP+ ++AK+E+  +E   PI QD KKGKLRY    +P++    NYG FPQTWEDP+ A+ E + A+GDNDP+DV+EIGE     G++ +VK LG +
Sbjct:    9 GAKNTLDYRVF-IEKAGKVVSPFHDIPLYADEENQIFNMVVEIPRWTNAKLEITKEEAMNPIIQDTKKGKLRYVRNCFPHHGYIHNYGAFPQTWEDPNVAHPETK-AYGDNDPLDVLEIGETIAYTGQVKQVKVLGVM 144          

HSP 2 Score: 37.3502 bits (85), Expect = 2.757e-35
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 3
Query:  426 EALGCLTMIDEGELDWKIVAISLDDPKA 509
            + LG + ++DEGE DWKI+ I + DP A
Sbjct:  139 KVLGVMALLDEGETDWKIIVIDVHDPLA 166          
The following BLAST results are available for this feature:
BLAST of CF504184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
IPYR1_ARATH8.147e-7983.67Soluble inorganic pyrophosphatase 1, chloroplastic... [more]
IPYR1_CHLRE4.142e-5362.22Soluble inorganic pyrophosphatase 1, chloroplastic... [more]
IPYR_MOUSE5.988e-4252.17Inorganic pyrophosphatase OS=Mus musculus GN=Ppa1 ... [more]
IPYR_BOVIN1.726e-4153.62Inorganic pyrophosphatase OS=Bos taurus GN=PPA1 PE... [more]
IPYR_MACFA3.819e-4152.90Inorganic pyrophosphatase OS=Macaca fascicularis G... [more]
IPYR_HUMAN3.819e-4152.90Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 ... [more]
IPYR_PONAB2.435e-4052.17Inorganic pyrophosphatase OS=Pongo abelii GN=PPA1 ... [more]
IPYR2_HUMAN1.957e-3645.81Inorganic pyrophosphatase 2, mitochondrial OS=Homo... [more]
IPYR2_MOUSE1.623e-3545.86Inorganic pyrophosphatase 2, mitochondrial OS=Mus ... [more]
IPYR_ASHGO2.757e-3551.45Inorganic pyrophosphatase OS=Ashbya gossypii GN=IP... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-672 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504184 ID=CF504184; Name=CF504184; organism=Citrus sinensis; type=EST; length=521bp
CTGTTTTCATGTAGGGCTATTTATAATCCACAGGTTCAAATCACAGAGGA
GGGCCAGCCTGAAACTCTAGATTACAGAGTCTTTTTCGTCAACAATTCTG
GCAAAAAGGTTTCTCCCTGGCATGACATACCACTGCAATTGGGTGACGGT
GTTTTCAACTTTGTTGTTGAAATACCCAAAGAATCAAGTGCAAAGATGGA
GGTTGCTACTGATGAGCTATACACCCCTATTAAACAGGATATAAAGAAGG
GGAAGCTTCGATACTACCCATACAACATAAATTGGAATTATGGATTGTTT
CCACAAACATGGGAAGATCCATCTTTTGCAAACTCTGAAGTTGAAGGGGC
ATTTGGGGATAATGATCCAGTTGATGTTGTTGAGATTGGTGAAAGAAGGA
GAAAGATTGGTGAAATTCTTAAGGTGAAGCCCTTGGGTGCCTTACCATGA
TTGATGAAGGTGAACTTGACTGGAAAATAGTGGCAATTTCATTGGATGAT
CCAAAGGCTGCCCCTTGTAAA
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