CF504213
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_AVIMR (40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 4.234e-50 Identity = 95/112 (84.82%), Postives = 109/112 (97.32%), Query Frame = -1 Query: 205 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 540 RLVRELEKKFSGK+VVLIATRRI+RPPKKGSAVQ PRSRTLTAVHDAMLED+VYPAEIVGKRVRYRLDGSKI+K+FLDPK +N+TE KLE+F+GVYRKL+GKDVVF++P+T+ Sbjct: 79 RLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLTAVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGKDVVFEFPLTE 190
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_ORYSJ (40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7 PE=2 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 5.530e-50 Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = -1 Query: 205 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 540 RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAV PR+RTLTAVHD +LEDVVYPAEIVGKRVRY LDG KI+KIFLDPKERNNTEYKL++FS VYR+L GKDVVFDYP+T+ Sbjct: 79 RLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGKDVVFDYPMTE 190
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_SECCE (40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 3.585e-49 Identity = 93/112 (83.04%), Postives = 105/112 (93.75%), Query Frame = -1 Query: 205 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 540 RLVRELEKKFSGKDVV++ATRRIVRPPKKGSAV PR+RTLTAVHD +LEDVVYPAEIVGKRVRYRLDGSKIIKIFLDP ERNNTEYKL++F+ VYR+L GKDVV++YP+ + Sbjct: 79 RLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLTAVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGKDVVYEYPVAE 190
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS71_ARATH (40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 4.682e-49 Identity = 92/113 (81.42%), Postives = 108/113 (95.58%), Query Frame = -1 Query: 202 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 540 RLVRELEKKFSGKDV+LIATRRIVRPPKKGSA + PR+RTLT+VH+A+L+DVV PAEIVGKR RYRLDG+KI+K+FLDPKERNNTEYK+E+FS VY+KLTGKDVVF++PIT+A Sbjct: 79 RLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGKDVVFEFPITEA 191
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_BRAOL (40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 7.986e-49 Identity = 90/113 (79.65%), Postives = 105/113 (92.92%), Query Frame = -1 Query: 205 SRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 543 SRLVRELEKKFSG DV+ +ATRRI+RPPKKGSAVQ PR+RTLT+VH+AMLEDV YPAEIVGKR RYR+DG+KI+K++L+PKERNNTEYKLE+ GVYRKLTGKDVVF+YP+ D Sbjct: 78 SRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGKDVVFEYPVAD 190
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_HORVU (40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.967e-47 Identity = 92/112 (82.14%), Postives = 104/112 (92.86%), Query Frame = -1 Query: 205 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 540 RLVRELE+ SGKDVV +ATRRIVRPPKKGSAVQ PR+RTLTAVHD +LEDVVYPAEIVGKRVRYRLDG+K+IKI+LDPKERNNTEYKLE+FS VYR+L GKDVVF+YP+ + Sbjct: 79 RLVRELER-VSGKDVVFVATRRIVRPPKKGSAVQRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGKDVVFEYPVAE 189
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS73_ARATH (40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 3.355e-47 Identity = 88/110 (80.00%), Postives = 102/110 (92.73%), Query Frame = -1 Query: 211 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPI 540 RLVRELEKKFSGKDV+ + TRRI+RPPKKG+AVQ PR+RTLT+VH+AMLEDV +PAEIVGKR RYRLDGSKI+K+FLD KE+NNTEYKLE+ GVYRKLTGKDVVF+YP+ Sbjct: 79 RLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLTSVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGKDVVFEYPV 188
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS72_ARATH (40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.355e-47 Identity = 89/113 (78.76%), Postives = 104/113 (92.04%), Query Frame = -1 Query: 202 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQSPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 540 RLVRELEKKFSGKDV+ +ATRRI+RPPKKGSAVQ PR+RTLT+VH+AMLEDV YPAEIVGKR RYRLDG+KI+K+FLD K +N+TEYKLE+ GVYRKLTGKDVVF+YP+ +A Sbjct: 79 RLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGKDVVFEYPVIEA 191
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_XENLA (40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 3.480e-36 Identity = 74/113 (65.49%), Postives = 95/113 (84.07%), Query Frame = -1 Query: 214 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQS----PRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 540 RLVRELEKKFSGK VV IA RRI+ P + S ++ PRSRTLTAVHDA+LED+VYP+EIVG+R+R +LDGS++IK+ LD ++NN E+K+E+FSGVY+KLTGKDVVF++P Sbjct: 78 RLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEFP 190
BLAST of CF504213 vs. ExPASy Swiss-Prot
Match: RS7_ICTPU (40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.727e-35 Identity = 73/113 (64.60%), Postives = 94/113 (83.19%), Query Frame = -1 Query: 214 RLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQS----PRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 540 RLVRELEKKFSGK VV IA RRI+ P + S ++ PRSRTLTAVHDA+LED+VYP+EIVGKR+R +LD S++IK+ LD ++NN E+K+E+F+GVY+KLTGKDVVF++P Sbjct: 78 RLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVVFEFP 190 The following BLAST results are available for this feature:
BLAST of CF504213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504213 ID=CF504213; Name=CF504213; organism=Citrus sinensis; type=EST; length=543bpback to top |