CF504246
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.106e-34 Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 121 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHXXXXXXXXXXXXXXRSIFXXXXXXXXXXXXXXXXXMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 MTSS+H++SDN + E+++ +S Q P+ ++ SI T V G + RSIF VHLQLMG+QQ GVPLP+DAVEEPVFVNAKQYHGILRRRQSRA+ ES+NKV+KSRKPYLHESRHLHA++R RG Sbjct: 1 MTSSIHELSDNIGSHEKQEQRDSHFQPPIPS-ARNYESIVTSLVY---SDPGTTNSMAPGQYPYPDPYYRSIFAPPPQPYTG---------VHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRG 150
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32 Identity = 78/163 (47.85%), Postives = 100/163 (61.35%), Query Frame = 1 Query: 121 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHXXXXXXXXXXXXXXRSIFXXXXXXXXXXXXXXXXXMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 MTSSVH++SDN+++ +++ P+SQ + P+ G S SI T +V G RS+F V LQLMG+QQ GVPL DAVEEPVFVNAKQYHGILRRRQSRAK E+ N+ +K++KPY+HESRHLHA++R RG Sbjct: 1 MTSSVHELSDNNESHAKKERPDSQTRPQVPS-GRSSESIDTNSVYSEPMAHGL--------YPYPDPYYRSVFAQQAYLPHPYPG------VQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRG 148
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA5_ARATH (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.691e-22 Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 397 HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 HL++MG+ + VPLP E EP+FVNAKQYH ILRRR+ RAK E++NK++K RKPYLHESRHLHALKRARG Sbjct: 157 HLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARG 228
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA8_ARATH (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.454e-20 Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 1 Query: 418 QQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 Q VPLP D +E EPVFVNAKQ+H I+RRRQ RAK E++NK++K+RKPYLHESRH+HALKR RG Sbjct: 158 QMTRVPLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRG 222
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 412 GIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 G+ + +PLP + +EPVFVNAKQY ILRRRQ+RAKAE E K++KSRKPYLHESRH HA++R RG Sbjct: 151 GMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRG 216
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA6_ARATH (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 397 HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 H Q+ G+ + +PLP + E EP+FVNAKQY ILRRR+ RAK E++NK++K RKPYLHESRHLHALKR RG Sbjct: 150 HPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRG 221
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.239e-19 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 403 QLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 Q++ + VPLP + E +PVFVNAKQYH I+RRRQ RAK E++NK++++RKPYLHESRH+HALKR RG Sbjct: 160 QMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRG 229
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.895e-18 Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 409 MGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRAR 606 +G+ + LP D +EPV+VNAKQY GILRRR++RAKAE E KV++ RKPYLHESRH HA++RAR Sbjct: 156 LGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRAR 221
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA_RAT (Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus GN=Nfya PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.271e-14 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 430 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 +PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R RG Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRG 307
BLAST of CF504246 vs. ExPASy Swiss-Prot
Match: NFYA_MOUSE (Nuclear transcription factor Y subunit alpha OS=Mus musculus GN=Nfya PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.271e-14 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 430 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALKRARG 609 +PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R RG Sbjct: 251 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRG 312 The following BLAST results are available for this feature:
BLAST of CF504246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504246 ID=CF504246; Name=CF504246; organism=Citrus sinensis; type=EST; length=610bpback to top |