CF504270

Overview
NameCF504270
Unique NameCF504270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 8.887e-49
Identity = 97/173 (56.07%), Postives = 114/173 (65.90%), Query Frame = 1
Query:   19 EELPPGYRFFPTEEELVSFYLINKLE-------------------------ELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKSESFRAFDRRP 462
            +E+  G+RF+PTEEELVSFYL N+LE                          + G +C+GD EQWFFF PRQ        PSRTT SGYWKATGSP  V+S DN++IG KKTMVFY GKAPTGRKTKWKM+EY A++   N S   IPKLR EFSLCR+Y+ + S RAFDRRP
Sbjct:    3 DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDETVNAS--TIPKLRREFSLCRVYITTGSSRAFDRRP 173          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.519e-40
Identity = 92/175 (52.57%), Postives = 105/175 (60.00%), Query Frame = 1
Query:   19 EELPPGYRFFPTEEELVSFYLI------------------------NKLEELCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEA 471
            EEL  G+RF+PTE EL+++YL                          +L  L GE+C+GD EQW FF PRQ        PSRTT SGYWKATGSP  V+S DNRVIGVKKTMVFY GKAPTGRKTKWKM+EY+A+E A   S + IP             KS S RAFDRRP EA
Sbjct:    3 EELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVETA---SVSTIP-------------KSGSSRAFDRRPTEA 161          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.197e-26
Identity = 64/177 (36.16%), Postives = 95/177 (53.67%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAAPREEQPHG 498
            LPPG+RF+PT+EEL+  YL  K+       ++ G+             K     ++W+FF+PR         P+R   SGYWKATG+   + ++D R +G+KK +VFY GKAP G KT W MHEYR IE + +   + +     ++ LCRIY K+   +     P++A   E   +G
Sbjct:   14 LPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-TADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKL----DDWVLCRIYKKTSGSQRQAVTPVQACREEHSTNG 185          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.076e-25
Identity = 70/177 (39.55%), Postives = 91/177 (51.41%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKSESFRAFDRRPLEAAPREEQPHG 498
            LPPG+RF+PT+EEL+  YL  K        +L  E             K     ++W+FF+PR         P+R   SGYWKATG+   V S++ R +G+KK +VFY GKAP G KT W MHEYR IE    PSR        ++ LCRIY K  S +      L  + RE   +G
Sbjct:   14 LPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-VISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE----PSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSGREYSNNG 185          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.169e-24
Identity = 65/161 (40.37%), Postives = 85/161 (52.80%), Query Frame = 1
Query:   13 TMEELPPGYRFFPTEEELVSFYLINKLE------ELCGE-------------KCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKSES 438
            T   LPPG+RF+PT+EEL+  YL  K        +L  E             K     ++W+FF+PR         P+R   SGYWKATG+   + S++ + +G+KK +VFY GKAP G KT W MHEYR IE    PSR        ++ LCRIY K  S
Sbjct:   10 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-STEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE----PSRRNGSTKLDDWVLCRIYKKQSS 165          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.994e-24
Identity = 60/162 (37.04%), Postives = 86/162 (53.09%), Query Frame = 1
Query:    1 LKYKTMEELPPGYRFFPTEEELVSFYLINK-LEELCG------------------EKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVK 429
            ++  +   LPPG+RF PT+EEL+ +YL N+ + + C                   EK +    +W+FF+PR+        P+R   SGYWKATG+   ++S  + V GVKK +VFYKG+ P G KT W MHEYR  +     ++        E+ LCRIY K
Sbjct:    1 MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNV-GVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKK 161          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.688e-23
Identity = 65/185 (35.14%), Postives = 84/185 (45.41%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINKLEEL-------------------CGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDN-RVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKSESFRAFDRRPLE------AAPREEQPHGG 501
            LPPG+RF PT+EELV  YL  K+                        EK     ++W+FFTPR         P+R    GYWKATG+   V    + R +G+KK +VFY GKAP G KT W MHEYR  +    P      +   E+ LCR+Y K  ++        +      AAPR      G
Sbjct:   21 LPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKLEQQDVASVAAAAPRNHHHQNG 205          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.204e-23
Identity = 60/169 (35.50%), Postives = 83/169 (49.11%), Query Frame = 1
Query:   22 ELPPGYRFFPTEEELVSFYLINKLEEL-------------------CGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRH------EFSLCRIYVKSESFRAFD 453
            +LPPG+RF PT++ELV +YL  K   L                     E+  G  ++W+FF+PR         P+R   +GYWKATG+   V S   R + +KK +VFY GK P G KT W MHEYR  +   + +   + K  H      ++ LCRIY K      +D
Sbjct:    8 QLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSP--RAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIERYD 174          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.760e-23
Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 1
Query:   25 LPPGYRFFPTEEELVSFYLINKL----------EELCGEKCQ----------GDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSDN-RVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIEGASNPSRAVIPKLRHEFSLCRIYVKS 432
            LPPG+RF PT+EEL++FYL +K+           E+   +C+          G+ E W+F++ R          +R T +GYWKATG    V+S    +++G+KKT+VFYKG+AP G KTKW MHEYR     S+         + E+ +CR++ K+
Sbjct:   22 LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGERE-WYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTC-----KEEWVICRVFNKT 172          
BLAST of CF504270 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.910e-23
Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 1
Query:   10 KTMEELPPGYRFFPTEEELVSFYLINKLEE-------------------------LCGEKCQGDTEQWFFFTPRQXXXXXXXXPSRTTASGYWKATGSPSYVYSSD-NRVIGVKKTMVFYKGKAPTGRKTKWKMHEYR--AIEGASNPSRAVIP---KLRHEFSLCRIYVKSE--SFRAFDRRPLEAAPRE 483
            K  + L PG+RF PT+EELVSFYL  K++                          + GEK      +W+F+ PR         P+R T +G+WKATG+   +YSS+ N+ IG+KK++VFYKG+A  G KT W MHE+R  ++   S PS+            +++CRI+ K+   + RA     + + P E
Sbjct:   11 KMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEK------EWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLRALSHSFVSSLPPE 195          
The following BLAST results are available for this feature:
BLAST of CF504270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC90_ARATH8.887e-4956.07NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC61_ARATH1.519e-4052.57Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC72_ARATH6.197e-2636.16NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC55_ARATH3.076e-2539.55NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC19_ARATH1.169e-2440.37NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC29_ARATH1.994e-2437.04NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC68_ORYSJ1.688e-2335.14NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC71_ORYSJ2.204e-2335.50NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC31_ARATH3.760e-2337.58Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC9_ARATH4.910e-2334.55Putative NAC domain-containing protein 9 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-759 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504270 ID=CF504270; Name=CF504270; organism=Citrus sinensis; type=EST; length=506bp
CTAAAATACAAGACAATGGAGGAACTCCCACCTGGTTATCGTTTCTTTCC
AACAGAAGAGGAGTTGGTTTCCTTCTATTTAATCAACAAGCTTGAAGAGC
TATGCGGAGAGAAATGTCAAGGAGACACCGAGCAATGGTTTTTCTTCACG
CCGAGACAAGAGAGGGAAGAACGGGGCGGGAGACCGAGCAGAACCACTGC
TTCTGGGTATTGGAAGGCCACAGGCTCACCGAGCTATGTATATTCATCCG
ATAACCGGGTGATCGGGGTAAAGAAGACGATGGTTTTCTATAAGGGTAAG
GCTCCGACTGGGAGAAAAACCAAATGGAAGATGCATGAGTATAGAGCCAT
TGAAGGAGCATCCAATCCATCCAGAGCTGTCATTCCTAAGTTGAGGCATG
AATTCAGCCTGTGCCGAATCTATGTGAAATCCGAAAGCTTTCGAGCATTT
GATAGACGCCCGCTGGAAGCAGCACCGAGAGAGGAACAACCTCATGGTGG
TGGGGC
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