CF504347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.700e-36 Identity = 65/82 (79.27%), Postives = 70/82 (85.37%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSKDQSAILEE+FK+H+TLNP GLR RQVEVWFQNRRARTKLKQTEVDCEFL+RCCENLTEENRRLQKE Sbjct: 129 KKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKE 210 HSP 2 Score: 37.3502 bits (85), Expect = 2.700e-36 Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 3 Query: 3 SSVSGKRSEREPNGDELEMERACSRGISDEEDGDTFKKE 119 SS +GKRSERE + D SRGISD+EDGD +K+ Sbjct: 97 SSSTGKRSEREEDTDPQG-----SRGISDDEDGDNSRKK 130
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 4.420e-33 Identity = 62/82 (75.61%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSKDQSA LEE+FKEHNTLNP L RQVEVWFQNRRARTKLKQTEVDCE+LKRC E LTEENRRLQKE Sbjct: 130 KKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKE 211 HSP 2 Score: 35.8094 bits (81), Expect = 4.420e-33 Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 3 SSVSGKRSERE----------PNGDELEMERACSRGISDEED--GDTFKKE 119 S++SGKRSERE + DE+ +R SRG SDEE+ G+T +K+ Sbjct: 81 STISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKK 131
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.809e-32 Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSKDQSA+LE++FKEHNTLNP GL RQVEVWFQNRRARTKLKQTEVDCE+LKRC E LTEENRRL+KE Sbjct: 135 KKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKE 216 HSP 2 Score: 31.9574 bits (71), Expect = 2.809e-32 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 3 SSVSGKR--SEREPN-----GDELE--MERACSRGISDEED---GDTFKKE 119 S+VSGKR +ERE GD+L+ ++R+ SRG SDEE+ G+T +K+ Sbjct: 86 STVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKK 136
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.006e-31 Identity = 65/82 (79.27%), Postives = 69/82 (84.15%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSKDQSA+LE+SF+EH TLNP GLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQKE Sbjct: 82 KKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKE 163
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.006e-31 Identity = 65/82 (79.27%), Postives = 69/82 (84.15%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSKDQSA+LE+SF+EH TLNP GLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCE LTEENRRLQKE Sbjct: 82 KKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKE 163
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 3.822e-31 Identity = 64/82 (78.05%), Postives = 69/82 (84.15%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSKDQSA LE+SFKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE+LTEENRRLQKE Sbjct: 190 KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKE 271
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.519e-31 Identity = 64/82 (78.05%), Postives = 68/82 (82.93%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSK+QSA LEESFKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRLQKE Sbjct: 177 KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE 258
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.519e-31 Identity = 64/82 (78.05%), Postives = 68/82 (82.93%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSK+QSA LEESFKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRLQKE Sbjct: 90 KKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE 171
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.477e-30 Identity = 63/82 (76.83%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSK+QSA LEESFKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRL KE Sbjct: 174 KKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKE 255
BLAST of CF504347 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 2.477e-30 Identity = 63/82 (76.83%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 116 RSLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 361 + LRLSK+QSA LEESFKEH+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LTEENRRL KE Sbjct: 174 KKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKE 255 The following BLAST results are available for this feature:
BLAST of CF504347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504347 ID=CF504347; Name=CF504347; organism=Citrus sinensis; type=EST; length=362bpback to top |