CF504369

Overview
NameCF504369
Unique NameCF504369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13176 contig Csv1_Contig13176:490..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.679e-55
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGI WATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:   86 EGICWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.213e-54
Identity = 99/105 (94.29%), Postives = 103/105 (98.10%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_WHEAT (Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.052e-53
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME MVPLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQ 190
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 4.572e-53
Identity = 97/105 (92.38%), Postives = 103/105 (98.10%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS+IRVGSYNGEEIYAPFKS+LPMVNP+D+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME+M+PLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYFGSLTQASSIRVGSYNGEEIYAPFKSLLPMVNPEDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENMIPLPGIYDPDFIAANQ 190
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 4.572e-53
Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD +QQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAM RARVFDIDLQKQLRPYME MVPLPGIYDPDFIAANQ
Sbjct:   88 EGISWATKDKIQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMTRARVFDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQ 192
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 5.972e-53
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAMARA+VFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYFGSLTQASTIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISGMNLADAMARAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 2.964e-52
Identity = 96/105 (91.43%), Postives = 103/105 (98.10%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME++VPLPGI+DPDFIAANQ
Sbjct:   87 EGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENIVPLPGIFDPDFIAANQ 191
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 2.964e-52
Identity = 96/105 (91.43%), Postives = 103/105 (98.10%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME++VPLPGI+DPDFIAANQ
Sbjct:   87 EGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENIVPLPGIFDPDFIAANQ 191
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 5.055e-52
Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISNMNLADAMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190
[Close]
BLAST of CF504369 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 6.602e-52
Identity = 96/105 (91.43%), Postives = 101/105 (96.19%), Query Frame = 2 
Query:    2 EGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 316
            EGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDDIVFGGWDIS+MNLAD+M RA+V DIDLQKQLRPYMESMVPLPGIYDPDFIAANQ
Sbjct:   86 EGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDIVFGGWDISNMNLADSMTRAKVLDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 190
The following BLAST results are available for this feature:
BLAST of CF504369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_CITPA1.679e-5599.05Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_NICPA9.213e-5494.29Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_WHEAT2.052e-5394.29Inositol-3-phosphate synthase OS=Triticum aestivum... [more]
INO2_ARATH4.572e-5392.38Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_MESCR4.572e-5392.38Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_TOBAC5.972e-5393.33Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_PHAVU2.964e-5291.43Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH2.964e-5291.43Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_ORYSJ5.055e-5291.43Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_MAIZE6.602e-5291.43Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-858 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504369 ID=CF504369; Name=CF504369; organism=Citrus sinensis; type=EST; length=318bp
AGAGGGAATCTCCTGGGCCACAAAGGACACTGTGCAACAAGCCAATTATT
TTGGTTCACTTACCCAAGCATCAGCAATTAGAGTTGGGTCTTACAATGGA
GAGGAGATTTATGCTCCATTCAAGAGCATTCTCCCTATGGTGAACCCAGA
TGACATTGTGTTTGGAGGATGGGACATTAGTGACATGAACTTGGCTGATG
CCATGGCCAGGGCTAGAGTGTTTGATATTGATCTTCAAAAGCAACTTAGG
CCTTACATGGAATCAATGGTCCCACTTCCTGGAATCTATGACCCTGATTT
CATTGCTGCCAATCAAGG
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