CF504414

Overview
NameCF504414
Unique NameCF504414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1296 contig Csv1_Contig1296:713..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504414 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.399e-21
Identity = 54/160 (33.75%), Postives = 90/160 (56.25%), Query Frame = 1
Query:   46 ATTLSFLILALASNSLLVLGTSSVPEPLLDVNGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWVKLEKIG 519
            AT +  L+ A  S S      ++   P+LD +G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +W K+EK G
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG 160          
BLAST of CF504414 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 3.226e-18
Identity = 53/162 (32.72%), Postives = 84/162 (51.85%), Query Frame = 1
Query:   37 ISLATTLSFLILALASNSLLVLGTSSVPEPLLDVNGNKVESTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWVKLEK 513
            +SL+      +LA A+N LL     S P P+LD++G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +W K+E+
Sbjct:    7 LSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE 165          
BLAST of CF504414 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.438e-15
Identity = 51/144 (35.42%), Postives = 75/144 (52.08%), Query Frame = 1
Query:  118 PEPLLDVNGNKVESTLKYYIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWVKLEKIGNFPGTYK 540
            P+P++D++G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  +  K++K G  P +YK
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYK 138          
The following BLAST results are available for this feature:
BLAST of CF504414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC1.399e-2133.7521 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.226e-1832.72Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA7.438e-1535.42Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-903 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504414 ID=CF504414; Name=CF504414; organism=Citrus sinensis; type=EST; length=540bp
AAACAGATATATAGCTTTGAAAACAACAAAATGAAGATTTCATTAGCAAC
AACACTCTCTTTCCTTATCCTTGCCTTGGCCTCAAACTCTTTGTTGGTCT
TGGGCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCAACGGCAACAAG
GTCGAATCCACCCTTAAGTACTACATAGTCTCAGCCATCTGGGGAGCTGG
CGGTGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATATTGTCCGCTGG
ACGTTATCCAATTACCTTCTGATATGCAAAATGGAATCGAATTAACACTG
TCACCGTATAACAATTCTACAATTGTCCGAGAATCCACTGATCTCAACTT
GAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAACGAACAACCGT
TGTGGAAAGTTGATAATTATGACGCTGCATCAGGCAAATGGTTTATAACA
ACCGGGGGACTTGATGGTCATCCTGGAGCTGAAACTTTGCTAAATTGGGT
TAAGCTTGAGAAAATTGGAAATTTTCCAGGTACATACAAA
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