CF504419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LUC7L_DICDI (Luc7-like protein OS=Dictyostelium discoideum GN=crop PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 76 MDAMRKQLDVLMGANRN---GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKM-DMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRL 390 MDA+R QLD +G +RN D +V + D D+C+ +L GLCPHELF + D+GPC K+H K+Y+ K K +Y+RE I+ LI + D+KI R +RL Sbjct: 1 MDAIRAQLDEFLGKDRNLLPKDRIKVENDFNDPDICKFFLCGLCPHELFTNANIRDLGPCSKLHDENCVKQYQNNKDKDKYDYEREWVRVIEGLISDNDKKIKRNKERL 109
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LUC7_SCHPO (U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe GN=usp106 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.037e-16 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 88 RKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRLE 393 RK ++ LMG+N + + DR VCR +L G+CPH++F TKMD+GPCPK+HS +L+ +YE A Y+ + + ++R + +C+++I A R E Sbjct: 6 RKIIEQLMGSNLSNFTSRGLVHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKIHSDKLKSDYERASYSHDYGYEWDYLEDLERHVDDCNKRIDIAEARRE 107
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LC7L2_HUMAN (Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.741e-16 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 85 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRLED 396 MR LD LMG +R+GD K+ D VC+ +L CPH++ T+MD+G C KVH L LR +YE A + ++ + D + I +CDR+ A KRL + Sbjct: 7 MRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAE 110
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LUC7L_MOUSE (Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 85 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRLED 396 MR LD LMG R+GD K+ D VC+ +L CPH++ T+MD+G C K+H L LR +YE A + ++ + D ++ I ECDR+ A KRL + Sbjct: 7 MRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAE 110
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LUC7L_HUMAN (Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.320e-15 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 85 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRLED 396 MR LD LMG R+GD K+ D VC+ +L CPH++ T+MD+G C K+H L LR +YE A + ++ + D ++ I ECDR+ A KRL + Sbjct: 7 MRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECTKIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAE 110
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LC7L2_MOUSE (Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.725e-15 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 1 Query: 85 MRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRLED 396 MR LD LMG +R+GD K+ D VC+ +L CPH++ T+MD+G C KVH L LR +YE A + ++ + D + I +CDR+ + KRL + Sbjct: 7 MRAMLDQLMGTSRDGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLALRADYEIASKEQDFFFELDAMDHLQSFIADCDRRTEVSKKRLAE 110
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LC7L3_PONAB (Luc7-like protein 3 OS=Pongo abelii GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.490e-14 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 97 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRL 390 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARL 107
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LC7L3_MOUSE (Luc7-like protein 3 OS=Mus musculus GN=Luc7l3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.490e-14 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 97 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRL 390 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARL 107
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LC7L3_HUMAN (Luc7-like protein 3 OS=Homo sapiens GN=LUC7L3 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.490e-14 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 97 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRL 390 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARL 107
BLAST of CF504419 vs. ExPASy Swiss-Prot
Match: LC7L3_BOVIN (Luc7-like protein 3 OS=Bos taurus GN=LUC7L3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.490e-14 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 97 LDVLMGANRN--GDVREVNRKYYDRDVCRLYLAGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGVDNYDRELEDAIDRLIGECDRKIGRALKRL 390 LD LMG +RN D + N ++ VC+ YL G CP ELF T+ D+GPC K+H LRK+YE++ Y+R+ + L+ E +R+I R RL Sbjct: 8 LDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQYEKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARL 107 The following BLAST results are available for this feature:
BLAST of CF504419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504419 ID=CF504419; Name=CF504419; organism=Citrus sinensis; type=EST; length=411bpback to top |