CF504439

Overview
NameCF504439
Unique NameCF504439
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length387
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF504439 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.151e-17
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 3 
Query:  198 QRMELAVNLPPVPEVPGRLPLIGNLLQLKEKKPHMTFTRWAEMYGPIYSIKTGASSMIGLNS 383
            + M     LP VP VPG  P+IGNLLQLKEKKPH TFTRW+E+YGPIYSIK G+SS+I LNS
Sbjct:   33 KNMSEVSTLPSVPVVPG-FPVIGNLLQLKEKKPHKTFTRWSEIYGPIYSIKMGSSSLIVLNS 93
The following BLAST results are available for this feature:
BLAST of CF504439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KO1_ARATH3.151e-1769.35Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-928 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504439 ID=CF504439; Name=CF504439; organism=Citrus sinensis; type=EST; length=387bp
GAACATCTCTATCTACAGAATCTTAGACCTTTTTCACTATACTTGGTATT
AAAAAAAAAAAACAACAATGGCCACCAAAGAGTACGTCACCTCAAGCATT
TCAAGAATTTCAAGCAGTACCCTTTGCCACCTCCATTGCTCTTGGTACTC
TCTCTGTGTTTTTCTTCTTGTTCTTCATTAGAGGGTTCATCTCCAGGCAG
AGGATGGAATTGGCTGTTAATCTTCCACCTGTTCCAGAGGTTCCAGGAAG
GCTACCCCTTATAGGAAATTTGTTACAGTTGAAAGAGAAGAAACCACACA
TGACTTTCACAAGATGGGCAGAGATGTATGGACCAATTTATTCTATCAAA
ACTGGAGCTTCCTCTATGATTGGTCTCAATTCGGCTG
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