CF504445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.956e-16 Identity = 39/67 (58.21%), Postives = 43/67 (64.18%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGR 200 G+ T RKRE+AAFFAQT HETTGGW AP G YAWGYCY+R+ S PGQ YYGR Sbjct: 131 GDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGR 197
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.916e-14 Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGR 200 G+ +RKRE+AAF QT HETTGGW AP G YAWGYC++++ +P+S+ PG+ YYGR Sbjct: 48 GSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGR 114
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.916e-14 Identity = 38/67 (56.72%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIR-QVSPASSDXXXXXXXXXLPGQYYGR 200 G+ T RKREIAAF AQT HETTGGW AP G YAWGYCY+R Q SP + +YYGR Sbjct: 111 GDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGR 177
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.502e-14 Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGR 200 G+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GR Sbjct: 125 GDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGR 191
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.502e-14 Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGR 200 G+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GR Sbjct: 121 GDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGR 187
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.502e-14 Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGR 200 G+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GR Sbjct: 113 GDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGR 179
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.502e-14 Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGR 200 G+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GR Sbjct: 126 GDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGR 192
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.268e-14 Identity = 36/67 (53.73%), Postives = 42/67 (62.69%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGR 200 G+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R+ PG +Y+GR Sbjct: 115 GDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGR 181
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.575e-14 Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGR 200 G+ RKREIAAF QT HETTGGW AP G YAWGYC++R+ +P++ QYYGR Sbjct: 122 GDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGR 187
BLAST of CF504445 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.575e-14 Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 3 Query: 3 GNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVS 134 G++ MRKREIAAF QT HETTGGW DAP G YAWGYCY+++++ Sbjct: 135 GDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN 178 The following BLAST results are available for this feature:
BLAST of CF504445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504445 ID=CF504445; Name=CF504445; organism=Citrus sinensis; type=EST; length=201bpback to top |