CF504536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504536 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.913e-23 Identity = 53/106 (50.00%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 1 GPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPSSCSLTAINNGGGLYYCNGED 318 GPH FAVTRA+ G SC DVLRVMQHEP+LMFETLKHRA E+CGQ + Q F +MPYLV ++C L A+ N G YYC+G+D Sbjct: 614 GPHGFAVTRAVAGSSCADVLRVMQHEPQLMFETLKHRALEFCGQH------------DDDSVVNAGVLANSLAQSFDNMPYLVSSTTCCLNALTNNNGFYYCSGDD 707
BLAST of CF504536 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.362e-17 Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 1 Query: 1 GPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEH 138 GPHSFAVTRA+PGPSCGDVLRVMQH+PELMFETLKHRA+EY ++ Sbjct: 601 GPHSFAVTRAVPGPSCGDVLRVMQHQPELMFETLKHRAQEYVSHDN 646
BLAST of CF504536 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.770e-15 Identity = 48/106 (45.28%), Postives = 56/106 (52.83%), Query Frame = 1 Query: 1 GPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPS---SCSLTAINNGGGLYYCN 309 GPHSFAVTRA+PG S DVLR MQHEPELMF+TLKHRAEE + + FH+MPYL S SL+A + G YYC+ Sbjct: 601 GPHSFAVTRAVPGQSSADVLRAMQHEPELMFQTLKHRAEEMMHTKGGSEGENEEEEED----DEFNNVAASLDRSFHNMPYLATEQASPSNSLSAAISNLGFYYCD 702
BLAST of CF504536 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.444e-14 Identity = 45/99 (45.45%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 1 GPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPSSCSLTAINNGGGL 297 GP S+AVTRA+PGPS DVLRVM HEPELMF+TLKHRAEE C ++ Q F+S PYLV + +NG GL Sbjct: 610 GPQSYAVTRAVPGPSSSDVLRVMHHEPELMFQTLKHRAEE-CDNDY-----------------TAGPLADMLAQSFNSTPYLVPGHATGSCGFSNGSGL 690
BLAST of CF504536 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.192e-14 Identity = 46/104 (44.23%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 1 GPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPSSC-SLTAINNGGGLYYCN 309 GPH FAVTRA+ G S DVLR MQHEPELMF+TLKHRAEE + + F++MPYL + +S +LTA N G+YYC+ Sbjct: 589 GPHGFAVTRAVMGQSSADVLRAMQHEPELMFQTLKHRAEEPRNNNNKACGDKG---------NDKLVVASCLAKSFNNMPYLSMETSTNALTAAVNNLGVYYCD 683
BLAST of CF504536 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.287e-12 Identity = 33/40 (82.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 1 GPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEE 120 GPH FAVTRAM G S DVLR MQHEPELMF+TLKHRAEE Sbjct: 590 GPHGFAVTRAMMGQSSADVLRAMQHEPELMFQTLKHRAEE 629 The following BLAST results are available for this feature:
BLAST of CF504536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504536 ID=CF504536; Name=CF504536; organism=Citrus sinensis; type=EST; length=320bpback to top |