CF504551

Overview
NameCF504551
Unique NameCF504551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length488
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504551 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.213e-15
Identity = 47/129 (36.43%), Postives = 70/129 (54.26%), Query Frame = 3
Query:  105 LLLNVHRIHDYSTEVLEKT-QCTFLFKGPWFANMDILATVDPANVHHIMSSNFSNFPKGPEF-KRIFDILGDGIFNSDSDLWKNQRRFAQALMNRHSFYKFLVKSNQAKLEKGLIPILDHMSKQGTTVD 485
            LL N HR   +++++L+     TF+   P+ A    + T  PA V HI+ +NF+ + KG  F + I D LGDGIFN+D + WK QR+ +    N  S  KF+      +L   L+P+L   S   TT+D
Sbjct:   55 LLANFHRRIQWTSDILQTIPSSTFVLHRPFGARQ--VFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNSQTTLD 181          

HSP 2 Score: 21.9422 bits (45), Expect = 9.213e-15
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 1
Query:   49 SNNNGIPKNFPVVGTA 96
            + N  IPK++P+ G+A
Sbjct:   37 TTNTPIPKSYPIFGSA 52          
BLAST of CF504551 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14
Identity = 51/147 (34.69%), Postives = 70/147 (47.62%), Query Frame = 3
Query:   66 PKELPSRRYRLPHLLLNVHRIHDYSTEVLEKT-----QCTFLFKGPWFANMDILATVDPANVHHIMSSNFSNFPKGPEFKRIF-DILGDGIFNSDSDLWKNQRRFAQALMNRHSFYKFLVKSNQAKLEKGLIPILDHMSKQGTTVDL 488
            PK LP     LP+L+ N  RIHD+  + L  T      CT +      A      T  P NV HI+ + F N+PKGP ++  F D+LG GIFNSD D W  QR+ A       +  + + +     ++  L  ILD   +    VDL
Sbjct:   33 PKVLPFVG-SLPYLIANRSRIHDWIADNLRATGGTYQTCTMVIPFVAKAQGFYTVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNGTIKNRLWLILDRAVQNNKPVDL 178          
BLAST of CF504551 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13
Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = 3
Query:   96 LPHLLLNVHRIHDYSTEVLEK---TQCTFLFKGPWFANMDILATV--DPANVHHIMSSNFSNFPKGPEFKRIF-DILGDGIFNSDSDLWKNQRRFAQALMNRHSFYKFLVKSNQAKLEKGLIPILDHMSKQGTTVDL 488
            LP L+    R+HD+ TE L     T  T +   P+ A    L TV  DP N+ H++ + F N+PKGP ++ +F D LG GIFNSD D W  QR+ A       +  + + +     ++    PIL+        VDL
Sbjct:   39 LPGLIEQRDRMHDWITENLRACGGTYQTCICAVPFLAKKQGLVTVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPVDL 175          
BLAST of CF504551 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.275e-11
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 3
Query:  111 LNVHRIHDYSTEVLEKTQCTFLFKGPWFANMDILATVDPANVHHIMSSNFSNFPKGP-EFKRIFDILGDGIFNSDSDLWKNQRRFAQA 371
            +N  R+HDY T+  ++ + TF    P       + T DP NV HI+ +NF+N+ KG   +  + D+LGDGIFN D D W+ QR+ A +
Sbjct:   48 INFERLHDYHTDQAQRYK-TFRVVYP---TCSYVFTTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASS 131          
The following BLAST results are available for this feature:
BLAST of CF504551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
C94A2_VICSA9.213e-1536.43Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A1_ARATH4.897e-1434.69Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
C86A2_ARATH5.415e-1334.31Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C04C1_PINTA2.275e-1139.77Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-040 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504551 ID=CF504551; Name=CF504551; organism=Citrus sinensis; type=EST; length=488bp
GATATCTTCTTGGCAATCATTTGCTTCTTGATTCTTCGATATTGTTTCAG
CAATAACAATGGAATCCCAAAGAACTTCCCAGTCGTAGGTACCGCCTGCC
ACACCTTCTTCTTAACGTTCATCGTATCCATGATTATAGCACAGAAGTTC
TAGAGAAAACTCAATGCACATTTTTATTCAAAGGTCCTTGGTTCGCAAAC
ATGGACATATTGGCCACAGTTGATCCAGCCAACGTACATCACATAATGAG
CTCAAACTTCTCAAATTTCCCGAAAGGGCCAGAGTTCAAGCGAATCTTTG
ATATTTTAGGAGATGGGATTTTCAACTCCGACTCAGATTTGTGGAAAAAC
CAAAGAAGGTTTGCTCAAGCTTTGATGAATCGTCATAGCTTCTACAAGTT
TTTGGTGAAATCCAATCAAGCTAAACTGGAGAAAGGGCTGATTCCAATTC
TTGATCACATGTCCAAACAAGGCACAACAGTTGATCTG
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