CF504610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504610 vs. ExPASy Swiss-Prot
Match: TAF1A_ARATH (Transcription initiation factor TFIID subunit 1-A OS=Arabidopsis thaliana GN=HAF1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.228e-21 Identity = 50/106 (47.17%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 98 EKPREEELLQXXXXXXXPEIGDDYLEDYRAKRNDRRMLERDRGAKRKPGAELGKHSADYGPPTKRRRGGKVGLSNILQRIVETLRENTELSYLYLKPVAKKEAPDY 415 E+ R++ + PEI + YLEDY ++NDRR+ ER R + + ++ + A+Y P KRR+ G+VGL+NIL+RIV+TLR E+S L+LKPV+KKEAPDY Sbjct: 1731 EEERQKAKKKKKKKKLQPEIVEGYLEDYPPRKNDRRLSERGRNVRSRYVSDFERDGAEYAPQPKRRKKGEVGLANILERIVDTLRLKEEVSRLFLKPVSKKEAPDY 1836
BLAST of CF504610 vs. ExPASy Swiss-Prot
Match: TAF1_ORYSJ (Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica GN=TAF1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.029e-16 Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 2 Query: 152 EIGDDYLEDYRAKRNDRRMLERDRGAKRKPGAELGKHSADYGPPTKRRRGGKVGLSNILQRIVETLRENTELSYLYLKPVAKKEAPDY 415 E DD L D R +NDRR+ ER R AKR+ A++ +Y PP KR RGG+V LSNIL++IV+ LR S+L+ KPV KKEAPDY Sbjct: 1647 EFRDDDLLDPRPYKNDRRVPERGRAAKRRTPADM----TEYTPPAKRHRGGEVELSNILEKIVDHLR-TMSCSFLFRKPVTKKEAPDY 1729
BLAST of CF504610 vs. ExPASy Swiss-Prot
Match: TAF1B_ARATH (Transcription initiation factor TFIID subunit 1-B OS=Arabidopsis thaliana GN=HAF2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.361e-12 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 170 LEDYRAKRNDRRMLERDRGAKRKPGAELGKHSADYGPPTKRRRGGKVGLSNILQRIVETLR-ENTELSYLYLKPVAKKEAPDY 415 LE+Y +RND E + ++ ++ +Y P KRR+ G+VGL+NIL+ IV+TLR + +SYL+LKPV KKEAP+Y Sbjct: 1617 LENYPPRRNDGISSESGQNINSLCVSDFERNRTEYAPQPKRRKKGQVGLANILESIVDTLRVKEVNVSYLFLKPVTKKEAPNY 1699 The following BLAST results are available for this feature:
BLAST of CF504610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504610 ID=CF504610; Name=CF504610; organism=Citrus sinensis; type=EST; length=415bpback to top |