CF504612

Overview
NameCF504612
Unique NameCF504612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_DANRE (Cytochrome b5 domain-containing protein 2 OS=Danio rerio GN=cyb5d2 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.118e-33
Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 3
Query:  174 LFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAEEAKQPGCNSRWSQDEGGR 623
            L T E+L+L+NG   S  + L ILG VFDV KG+ HYG GGGY+ F G+DASRAF++G+FT  GL++ +   S +++ ++ +W  FY R YT VGKL+GR+Y   G  T  L   EA  + G +   + ++E    P CNS WS+  GGR
Sbjct:   53 LLTKEQLSLYNGGKNSKGLYLAILGQVFDVEKGRKHYGPGGGYHFFTGKDASRAFITGDFTEAGLSNDVSDFSESQIVALYDWLSFYQRDYTPVGKLIGRFYTETGQPTDALLHVEAFLSDGLKKKAQAQSEMQLYPSCNSEWSEASGGR 202          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_MOUSE (Cytochrome b5 domain-containing protein 2 OS=Mus musculus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.047e-33
Identity = 68/151 (45.03%), Postives = 95/151 (62.91%), Query Frame = 3
Query:  171 RLFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAEEAKQPGCNSRWSQDEGGR 623
            RLF  EELA + G      + L +LG V+DV+ G+ HY  G  Y+ FAGRDASRAFV+G+++  GL D + GLSS+E+ ++  W  FY ++Y FVG+LVGR+Y   G  T  L   EA   +G +  E+++ E+ K P CNS WS  +G R
Sbjct:   36 RLFLPEELARYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDINGLSSSEILTLHNWLSFYEKNYVFVGRLVGRFYRKDGLPTSELTQVEAMVTKGMEANEQEQREKQKFPPCNSEWSSAKGSR 186          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_RAT (Cytochrome b5 domain-containing protein 2 OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.994e-32
Identity = 65/151 (43.05%), Postives = 95/151 (62.91%), Query Frame = 3
Query:  171 RLFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAEEAKQPGCNSRWSQDEGGR 623
            RLF  EELA + G      + L +LG V+DV+ G+ HY  G  Y+ FAGRDASRAFV+G+++  GL D + GLSS+E+ ++  W  FY ++Y FVG+L+GR+Y   G  T  L   EA   +G +  E+++ E+ + P CN+ WS  +G R
Sbjct:   36 RLFVPEELARYRGGPGDPGLYLALLGRVYDVSSGRKHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDVNGLSSSEILTLHNWLSFYEKNYVFVGRLIGRFYGKDGLPTSELTQVEAMVTKGMEANEQEQREKQRFPPCNAEWSSAKGSR 186          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_XENTR (Cytochrome b5 domain-containing protein 2 OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.837e-31
Identity = 66/147 (44.90%), Postives = 93/147 (63.27%), Query Frame = 3
Query:  171 RLFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAEEAKQPGCNSRWSQD 611
            RL + EEL++++G   S  I L ILG VFDV KG  HYG GG Y+ FAG+DASRA+++G+FT  GL D +  LS  ++  +  W  FY ++Y  +GKL GR+Y+  GN TK L+ A      G +L E+++ E  + P CNS WS +
Sbjct:   45 RLMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKHYGPGGSYSFFAGKDASRAYMTGDFTEKGLVDDVTELSPLQMLHLHNWLSFYQQNYITIGKLTGRFYDESGNPTKALEDALKVIDIGLKLKEEREEENKQFPPCNSEWSSE 191          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_HUMAN (Cytochrome b5 domain-containing protein 2 OS=Homo sapiens GN=CYB5D2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26
Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 3
Query:  171 RLFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAEEAKQPGCNSRWSQDEGGR 623
            RLF  EEL+ + G      + L +LG V+DV+ G+ HY  G  Y+ FAGRDASRAFV+G+ +  GL D +  LS+ E+ ++  W  FY ++Y  VG++ GR+Y   G  T  L   EA   RG +  + Q  E+   P CN+ WS   G R
Sbjct:   36 RLFIPEELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGLVDDVSDLSAAEMLTLHNWLSFYEKNYVCVGRVTGRFYGEDGLPTPALTQVEAAITRGLEANKLQLQEKQTFPPCNAEWSSARGSR 186          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_DROPS (Cytochrome b5 domain-containing protein 2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA11364 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26
Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 3
Query:  174 LFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFT--GDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAE-EAKQPGCNSRWSQDEGGR 623
            + T+ EL+ +NG D   PI L +LGSVFDVT+G  HYG G  YN F GRDAS AF+SG F        D +  L   ++  +  WR+FY + Y + GKL+GR+Y+ QG  T Y     A   + AQ+ + +  E  +K PGCN  WS+ +G R
Sbjct:   63 VLTSAELSKYNGEDGQ-PIYLALLGSVFDVTRGIKHYGTGCSYNFFVGRDASVAFISGEFEEYDPQTADDVLTLKPNDLLGLANWRDFYEKEYIYKGKLIGRFYDEQGEPTTYYHKYLALLEQ-AQIAKAEVDELRSKYPGCNIEWSEAKGTR 213          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEBR (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.275e-26
Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = 3
Query:  168 QRLFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAEEAKQPGCNSRWSQDEGGR 623
            + +FT E+L   +G+ +S P  L ILG V+DV   K +YG G  Y+HFAGRDA+RAF +G+FT +GL  S  GLS  E+ SI +W  FY + Y  VG +   YY++ G  T  L    A+  +  +  + Q  E    P CNS ++Q+ GGR
Sbjct:   98 KHVFTPEQLHFFDGSRDSKPCYLAILGRVYDVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFTENGLVASTHGLSHDELLSIRDWVSFYDKEYPLVGVVADLYYDSDGQPTAELTDVLARVEKANEYRKAQAVEIEVFPPCNSEYNQN-GGR 248          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_DROME (Cytochrome b5 domain-containing protein 2 homolog OS=Drosophila melanogaster GN=CG12056 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26
Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 3
Query:  174 LFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNF-TGDGLT-DSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKY-LKGAE-AKAARGAQLLEKQKAEE--AKQPGCNSRWSQDEGGR 623
            LFT  ELA  NG +E  P+ L +LGSVFDV++G  HYG G  YN F GRDAS +F+SG+F T D  T D +  L   ++  +  WR+FY + Y + G+++GR+Y+ +G  T Y  K  E  + AR A    K++ EE  A+ PGCN  WS++ G R
Sbjct:   63 LFTPAELAKFNGEEEGRPLYLALLGSVFDVSRGIKHYGSGCSYNFFVGRDASVSFISGDFETYDPETADDVLTLKPDDLIGLAGWRDFYQKDYVYKGRVIGRFYDEKGALTTYHHKFLELLEQARDA----KRQVEELRARYPGCNIEWSEERGTR 214          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEEL (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=tag-131 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 62/152 (40.79%), Postives = 89/152 (58.55%), Query Frame = 3
Query:  168 QRLFTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLVGRYYNNQGNATKYLKGAEAKAARGAQLLEKQKAEEAKQPGCNSRWSQDEGGR 623
            + +FT E+L   +GT +S PI L ILG V++V   K +YG G  Y+HFAGRDA+RAF +G+F   GL  +  GLS  E+ SI +W  FY + Y  VG +   YY+++G  T  L    A+  +  +  + Q  E    P CNS ++Q+ GGR
Sbjct:   98 KHVFTPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVGVVADLYYDSEGQPTPELTDVLARVEKANEYRKAQAVEIEVFPPCNSEYNQN-GGR 248          
BLAST of CF504612 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 3
Query:  177 FTAEELALHNGTDESIPILLGILGSVFDVTKGKSHYGVGGGYNHFAGRDASRAFVSGNFTGDGLTDSLRGLSSTEVKSIVEWREFYFRSYTFVGKLV 467
            FTAE+L+ +NGTDES PI + I G VFDVT GKS YG GG Y+ FAG+DASRA    +   + ++ SL GL+  E+ ++ +W   +   Y  VG++V
Sbjct:    3 FTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 99          
The following BLAST results are available for this feature:
BLAST of CF504612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CB5D2_DANRE2.118e-3345.33Cytochrome b5 domain-containing protein 2 OS=Danio... [more]
CB5D2_MOUSE8.047e-3345.03Cytochrome b5 domain-containing protein 2 OS=Mus m... [more]
CB5D2_RAT3.994e-3243.05Cytochrome b5 domain-containing protein 2 OS=Rattu... [more]
CB5D2_XENTR9.837e-3144.90Cytochrome b5 domain-containing protein 2 OS=Xenop... [more]
CB5D2_HUMAN1.470e-2640.40Cytochrome b5 domain-containing protein 2 OS=Homo ... [more]
CB5D2_DROPS2.507e-2642.48Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_CAEBR3.275e-2641.45Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_DROME4.277e-2644.23Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_CAEEL1.244e-2540.79Cytochrome b5 domain-containing protein 2 homolog ... [more]
SBP3_ARATH1.924e-1847.42Probable steroid-binding protein 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-101 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504612 ID=CF504612; Name=CF504612; organism=Citrus sinensis; type=EST; length=711bp
GAGTTTTCTCATTCTCCGTTGAAAAAACATAAACTTTGAGCCTTTTAACA
AAATTTCCGATGGTTGTTAAGAAAATAATATCATCCCCATTTGTGGCAAT
TGCAGTTTTAGTGACTTTGGTCGCTGTAATTTTCAGATTTTCTCCCAAAC
TCCTCCTCAGCCGTCAACAGAGATTGTTCACAGCTGAAGAATTGGCATTG
CACAATGGAACTGATGAATCAATACCAATCCTTTTAGGAATTCTTGGATC
AGTGTTTGATGTGACCAAAGGAAAATCTCATTATGGCGTTGGAGGAGGTT
ATAATCATTTTGCTGGAAGAGATGCTTCCCGTGCATTTGTTTCAGGAAAC
TTTACAGGAGATGGACTCACTGATTCATTGCGTGGTCTATCCAGCACAGA
GGTAAAGAGCATTGTCGAATGGCGGGAATTTTATTTCAGAAGTTACACAT
TTGTTGGTAAGCTAGTGGGTCGTTACTACAATAACCAGGGGAATGCTACA
AAATATCTGAAAGGAGCTGAAGCAAAGGCTGCTAGAGGGGCACAGCTTTT
GGAGAAACAGAAGGCTGAAGAGGCTAAACAACCTGGTTGCAACTCAAGGT
GGAGTCAGGATGAGGGTGGGAGAGGGTTGGTGCGACACCCGCTTCCCAAG
GTTAGTTCAAAGACCTTTAAAATTGCTTTGACTGGAAGATGAGCAAGCGA
TGTGCTTGCTT
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