CF504613

Overview
NameCF504613
Unique NameCF504613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length555
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.534e-60
Identity = 55/74 (74.32%), Postives = 66/74 (89.19%), Query Frame = 1 
Query:  334 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            +E+AALETW+NGKPY QS + EVPM+ R+  YY GWADKIHG+T+PGDG +H+QTLHEPIGVAGQI+PWNFPLL
Sbjct:  133 DEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLL 206

HSP 2 Score: 120.168 bits (300), Expect = 5.534e-60
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 2 
Query:  107 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            LI G+FVDA SGKTFP  DPR  EVIA V+EGDAED++RAVA ARKAFDEGPWPKMT YERS+I+ R ADLIEK
Sbjct:   57 LIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEK 130
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.074e-38
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPY+ S   ++ MV++ L YY GWADK HG T+P DG+Y   T HEP+GV GQI+PWNFPLL
Sbjct:  122 LAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLL 193

HSP 2 Score: 77.7962 bits (190), Expect = 1.074e-38
Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T +VI +VAEGD  D+DRAV  AR AF  G PW +M   ER R++ R ADLIE+
Sbjct:   44 INNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIER 117
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.823e-38
Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPYV S   ++ MV++ L YY GWADK HG T+P DG+Y   T HEP+GV GQI+PWNFPLL
Sbjct:  123 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLL 194

HSP 2 Score: 77.411 bits (189), Expect = 1.823e-38
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T +VI +VAEGD ED+DRAV  AR AF  G PW ++   +R R++ R ADLIE+
Sbjct:   45 INNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIER 118
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.375e-38
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPYV S   ++ MV++ L YY GWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL
Sbjct:  119 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 190

HSP 2 Score: 77.7962 bits (190), Expect = 2.375e-38
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M    R R++ R ADLIE+
Sbjct:   41 INNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIER 114
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.375e-38
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPYV S   ++ MV++ L YY GWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL
Sbjct:  119 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 190

HSP 2 Score: 77.7962 bits (190), Expect = 2.375e-38
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T EVI  VAEGD ED+D+AV  AR AF  G PW +M    R R++ R ADLIE+
Sbjct:   41 INNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIER 114
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.094e-38
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPYV S   ++ MV++ L YY GWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL
Sbjct:  121 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 192

HSP 2 Score: 77.411 bits (189), Expect = 3.094e-38
Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T EVI  VAEG+ ED+D+AV  AR AF  G PW +M   +R R++ R ADLIE+
Sbjct:   43 INNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIER 116
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.095e-38
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPYV S   ++ MV++ L YY GWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL
Sbjct:  102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 173

HSP 2 Score: 77.411 bits (189), Expect = 3.095e-38
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T EVI  VA GD ED+DRAV  AR AF  G PW +M   +R R++ R ADLIE+
Sbjct:   24 INNEWHDAVSKKTFPTVNPSTGEVICQVAAGDKEDVDRAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIER 97
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.844e-38
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPYV S   ++ MV++ L YY GWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL
Sbjct:  102 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 173

HSP 2 Score: 76.2554 bits (186), Expect = 6.844e-38
Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T EVI  VAEG  ED+D+AV  AR AF  G PW +M   +R R++ R ADLIE+
Sbjct:   24 INNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIER 97
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.911e-38
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 
Query:  340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            LAALET +NGKPYV S   ++ MV++ L YY GWADK HG T+P DG++   T HEP+GV GQI+PWNFPLL
Sbjct:  121 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 192

HSP 2 Score: 75.8702 bits (185), Expect = 8.911e-38
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328
            IN ++ DA S KTFP  +P T EVI  VAEG+ ED+D+AV  A+ AF  G PW +M   +R R++ R ADLIE+
Sbjct:   43 INNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIER 116
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.707e-36
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            E+  ELA LET +NGKP  ++   ++P+ +  + YY GW  KI G T+P  G Y   T HEP+GV GQI+PWNFPLL
Sbjct:   96 EHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWCTKITGQTIPVSGAYFNYTRHEPVGVVGQIIPWNFPLL 172

HSP 2 Score: 80.4925 bits (197), Expect = 4.707e-36
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 2 
Query:   41 LAQLLLLKSQSFHLFKLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            ++ L +  ++    F   T K  I+G+FV +ASG TF   +P T E +  + E  A D+D+AV  ARKAFD+G W  M+P  RSR+M + ADL+E+
Sbjct:    1 MSSLTMQVTKRLETFLQGTKKLYIDGKFVPSASGATFDTPNPATGETLMTLYEAQAADVDKAVKAARKAFDQGEWRTMSPASRSRLMYKLADLMEE 96
The following BLAST results are available for this feature:
BLAST of CF504613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
AL2B7_ARATH5.534e-6074.32Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
ALDH2_BOVIN1.074e-3862.50Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH2_PIG1.823e-3863.89Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
ALDH2_PONAB2.375e-3862.50Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HUMAN2.375e-3862.50Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
ALDH2_MOUSE3.094e-3862.50Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_HORSE3.095e-3862.50Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
ALDH2_MESAU6.844e-3862.50Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]
ALDH2_RAT8.911e-3862.50Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH4_BACSU4.707e-3650.65Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-102 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504613 ID=CF504613; Name=CF504613; organism=Citrus sinensis; type=EST; length=555bp
CTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCACAGC
TGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTACACCT
AAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAACATT
TCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTGAAG
GAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCATTT
GATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTAT
GTTGCGGGCTGCTGACTTGATTGAGAAAACATGGAGGAGCTGGCAGCTTT
GGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAG
TACCAATGGTGGTTCGCCTGTTGCACTATTATCTTGGATGGGCTGATAAA
ATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTT
ACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTC
TTCTC
back to top