CF504619

Overview
NameCF504619
Unique NameCF504619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 2.901e-68
Identity = 125/150 (83.33%), Postives = 135/150 (90.00%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            I LAVHRNLLRL GFC T  ER+LVYPYMPNGSVA RLRD+   +P+LDW RR  IALG ARGL+YLHEQC+PKIIHRDVKAANILLDE FEA+VGDFGLAKLLD RDSHVTTAVRGT+GHIAPEYLSTGQSSEKTDVFGFG+L+LELIT
Sbjct:  348 IGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELIT 497          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 2.456e-67
Identity = 128/150 (85.33%), Postives = 136/150 (90.67%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            ISLAVHRNLLRL G+C++ +ERLLVYPYM NGSVASRL+     +PALDW  RKKIA+G ARGL YLHEQCDPKIIHRDVKAANILLDE FEAVVGDFGLAKLL+H DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT
Sbjct:  348 ISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLK----AKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 493          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 2.299e-65
Identity = 118/150 (78.67%), Postives = 136/150 (90.67%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            IS+AVHRNLLRL GFC T  ERLLVYPYM NGSVAS LR+    +P LDW +R++IALG+ARGL YLH+ CDPKIIHRDVKAANILLDE+FEAVVGDFGLAKL+D++D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELIT
Sbjct:  338 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 487          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 3.002e-65
Identity = 120/150 (80.00%), Postives = 134/150 (89.33%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            IS+AVHRNLLRL GFC T  ERLLVYPYM NGSVAS LR+   G PALDW +RK IALG+ARGL YLH+ CD KIIHRDVKAANILLDE+FEAVVGDFGLAKL+++ DSHVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELIT
Sbjct:  343 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 492          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 3.002e-65
Identity = 120/150 (80.00%), Postives = 135/150 (90.00%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            IS+AVHRNLLRL GFC T  ERLLVYPYM NGSVAS LR+    +P LDW  RK+IALG+ARGL YLH+ CDPKIIHRDVKAANILLDE+FEAVVGDFGLAKL+D++D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+GI+LLELIT
Sbjct:  351 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 500          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 1.946e-64
Identity = 119/150 (79.33%), Postives = 133/150 (88.67%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            IS+AVHRNLLRL GFC T  ERLLVYPYM NGSVAS LR+   G PALDW +RK IALG+ARGL YLH+ CD KIIH DVKAANILLDE+FEAVVGDFGLAKL+++ DSHVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELIT
Sbjct:  324 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 473          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 3.107e-62
Identity = 116/150 (77.33%), Postives = 134/150 (89.33%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            IS+AVHRNLLRL GFC T  ERLLVYPYM NGSVAS LR+    +  L W+ R++IALG+ARGL YLH+ CDPKIIHRDVKAANILLDE+FEAVVGDFGLA+L+D++D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+GI+LLELIT
Sbjct:  354 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 503          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.705e-60
Identity = 113/150 (75.33%), Postives = 131/150 (87.33%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            IS+AVHRNLLRL GFC+T+ ERLLVYP+M N S+A RLR+   G P LDW  RK+IALG ARG  YLHE C+PKIIHRDVKAAN+LLDEDFEAVVGDFGLAKL+D R ++VTT VRGT+GHIAPEYLSTG+SSE+TDVFG+GI+LLEL+T
Sbjct:  339 ISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT 488          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.949e-41
Identity = 84/153 (54.90%), Postives = 112/153 (73.20%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL-DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            +S   H+N+++L GFC  + E++LVY Y+PNGS    LRD + G+    LDW RR KIALG+ +GL YLHE  DP IIHRDVK+ NILLDE   A V DFGL+KL+ D   +HVTT V+GT+G++ PEY  T Q +EK+DV+GFG+++LEL+T
Sbjct:  682 LSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGS----LRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLT 830          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.167e-39
Identity = 75/151 (49.67%), Postives = 108/151 (71.52%), Query Frame = 3
Query:    3 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            T+S A H NL+ L G+C+ +N++LL+Y YM NGS+   L + + G P+LDW  R +IA G A GL YLH+ C+P I+HRD+K++NILL + F A + DFGLA+L+   D+HVTT + GT+G+I PEY     ++ K DV+ FG++LLEL+T
Sbjct:  790 TLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLT 940          
The following BLAST results are available for this feature:
BLAST of CF504619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5457_ARATH2.901e-6883.33Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH2.456e-6785.33Probable LRR receptor-like serine/threonine-protei... [more]
BAK1_ARATH2.299e-6578.67BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK4_ARATH3.002e-6580.00Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK1_ARATH3.002e-6580.00Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK5_ARATH1.946e-6479.33Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK2_ARATH3.107e-6277.33Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5129_ARATH1.705e-6075.33Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH3.949e-4154.90Probable leucine-rich repeat receptor-like protein... [more]
PSKR1_DAUCA2.167e-3949.67Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-108 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504619 ID=CF504619; Name=CF504619; organism=Citrus sinensis; type=EST; length=456bp
AGACGATAAGTTTAGCTGTCCACCGGAATCTCCTCAGGCTCTGTGGTTTC
TGCTCTACTGAAAATGAAAGGCTTCTTGTTTATCCCTATATGCCAAATGG
TAGTGTAGCATCAAGATTAAGAGATCACATTCATGGTCGGCCAGCTTTAG
ATTGGGCAAGACGGAAAAAGATTGCCCTGGGCACGGCAAGGGGTCTGCTT
TATTTACATGAACAGTGTGACCCCAAAATTATCCACCGTGATGTCAAGGC
AGCCAACATTTTGCTGGATGAAGATTTTGAGGCAGTTGTCGGAGATTTTG
GATTAGCAAAGCTCTTGGATCACAGGGATTCCCATGTAACCACAGCTGTG
CGCGGCACTGTTGGCCATATTGCTCCAGAGTATTTATCAACGGGTCAGTC
TTCAGAAAAGACAGATGTATTTGGGTTTGGGATCTTGCTGCTTGAACTGA
TAACAG
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