CF504648

Overview
NameCF504648
Unique NameCF504648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 4.116e-102
Identity = 156/184 (84.78%), Postives = 165/184 (89.67%), Query Frame = 1
Query:   94 RNHTASEKDTLMPGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARP 645
            RNHTA  K  L  GK LGMPDGVLINGKGPY+YN TLV DGID+ETI VHPGKTYR+RV NVGISTSLNFRIQ HNL+LAE+EGSYTVQQNYTSLDIHVGQSYSFLVTMDQNAS+DYYIVASAR VNE+ W+RVTGV IL YTNSKGKA+G LP GP DEFDKTFSMNQARSIRWNVSASGARP
Sbjct:  168 RNHTALRK-ALDDGKDLGMPDGVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARP 350          

HSP 2 Score: 55.0694 bits (131), Expect = 4.116e-102
Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 3
Query:    6 FIINNRAIIPIPFDTPDGDITILIGDWY 89
            F++N RAIIP+PF TPDGDIT+ IGDWY
Sbjct:  139 FVVNPRAIIPVPFSTPDGDITVTIGDWY 166          

HSP 3 Score: 44.669 bits (104), Expect = 4.116e-102
Identity = 19/21 (90.48%), Postives = 21/21 (100.00%), Query Frame = 3
Query:  645 NPQGSFRYGSINVTEVYVLRN 707
            NPQGSF+YGSINVT+VYVLRN
Sbjct:  351 NPQGSFKYGSINVTDVYVLRN 371          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.511e-74
Identity = 131/184 (71.20%), Postives = 150/184 (81.52%), Query Frame = 1
Query:   94 RNHTASEKDTLMPGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARP 645
            +NHTA  +  L  GK LGMPDGVLINGKGP++YN++ VPDGI++ET+ V PGKTYRIRVHNVGISTSLNFRIQNH LLL ETEG YT Q N+T  D+HVGQSYSFLVTMDQNA++DYYIVASARFVNE+ W+RVTGV ILHY+NSKG A GPLP    D      +MNQ R+I+ N SASGARP
Sbjct:  171 QNHTALRR-ILDSGKELGMPDGVLINGKGPFKYNSS-VPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARP 352          

HSP 2 Score: 37.3502 bits (85), Expect = 2.511e-74
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:  645 NPQGSFRYGSINVTEVYVLRN 707
            NPQGSF YG IN+T  Y+LR+
Sbjct:  353 NPQGSFHYGQINITRTYILRS 373          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.759e-72
Identity = 129/184 (70.11%), Postives = 148/184 (80.43%), Query Frame = 1
Query:   94 RNHTASEKDTLMPGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARP 645
            ++H A  +  L  GK LGMPDGVLINGKGPY+YN++ VPDGIDY T  V PGKTYRIRVHNVGISTSLNFRIQNH+LLL ETEG YT Q N+T  D+HVGQSYSFLVTMDQ+A++DYYIVASARFVNE+ W+RVTGVAILHY+NSKG   GPLP    D      +M+Q ++IR N SASGARP
Sbjct:  172 QDHKALRR-ALDSGKELGMPDGVLINGKGPYKYNSS-VPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARP 353          

HSP 2 Score: 37.3502 bits (85), Expect = 1.759e-72
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:  645 NPQGSFRYGSINVTEVYVLRN 707
            NPQGSF YG IN+T  Y+LR+
Sbjct:  354 NPQGSFHYGQINITNTYILRS 374          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.974e-46
Identity = 83/184 (45.11%), Postives = 112/184 (60.87%), Query Frame = 1
Query:   94 RNHTASEKDTLMPGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDKTFSMNQARSIRWNVSASGARP 645
            ++HT  +K  L  G+ +G PDG++INGK           DG D     + PGKTYR+R+ NVG+ TS+NFRIQNH + L E EGS+ +Q +Y SLD+HVGQ +  +VT +Q    DYY+VAS+RF+       +T   +L Y   KG A   LP GP       +S+NQ RS RWN++AS ARP
Sbjct:  171 KSHTQLKK-FLDGGRTIGRPDGIVINGKSGKG-------DGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPK-DYYMVASSRFLKTV----ITTTGLLRYEGGKGPASSQLPAGP---VGWAWSLNQFRSFRWNLTASAARP 338          

HSP 2 Score: 45.0542 bits (105), Expect = 3.974e-46
Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = 3
Query:    3 GFIINNRAIIPIPFDTPDGDITILIGDWYTE 95
            G  +N+R +IP+P+  P+ D T+LIGDWYT+
Sbjct:  141 GLRVNSRLLIPVPYADPEDDYTVLIGDWYTK 171          

HSP 3 Score: 30.4166 bits (67), Expect = 3.974e-46
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  645 NPQGSFRYGSINVTEVYVLRNS 710
            NPQGS+ YG IN+T    L N+
Sbjct:  339 NPQGSYHYGKINITRTIKLVNT 360          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.396e-40
Identity = 79/178 (44.38%), Postives = 105/178 (58.99%), Query Frame = 1
Query:  115 KDTLMPGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNSKGKARGPLPEGPNDEFDK-TFSMNQARSIRWNVSASGARP 645
            K  L  G+ +G PDG++INGK   +      P         +  GKTYR R  N+G+ +S+N R Q H + L E EGS+TVQ  Y SLD+HVGQ  S LVT DQ    DYY+V S+RF+ ++    ++ VAI+ Y N KG A   LP  P +  +   +SMNQ RS RWN++AS ARP
Sbjct:  175 KKILDGGRTIGRPDGIIINGKSA-KVGEAKEP------LFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPK-DYYLVVSSRFLKQA----LSSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARP 340          

HSP 2 Score: 39.6614 bits (91), Expect = 3.396e-40
Identity = 12/28 (42.86%), Postives = 21/28 (75.00%), Query Frame = 3
Query:   12 INNRAIIPIPFDTPDGDITILIGDWYTE 95
            +++RA+IP+PFD P  +  + +GDWY +
Sbjct:  142 VHSRALIPVPFDNPADEYNVFVGDWYNK 169          

HSP 3 Score: 30.8018 bits (68), Expect = 3.396e-40
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 3
Query:  645 NPQGSFRYGSINVTEVYVLRNS 710
            NPQGS+ YG IN+T    + NS
Sbjct:  341 NPQGSYHYGQINITRTIKIFNS 362          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.713e-18
Identity = 64/195 (32.82%), Postives = 103/195 (52.82%), Query Frame = 1
Query:  130 PGKGLGMPDGVLINGKGPY------QYNTTLVP------DGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTS-LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY-TNSKGK-ARGPLPEGPN-DEFDKTFSMNQARSIRWNVSASGARPIHRVLFD 666
            P + +G P  +L+NG+G +      +Y++ L P      +        V P KTYRIR+ +     +LNF I NH LL+ E +G+Y VQ  YTS +DI+ G+SYS L+T DQN S +Y++    R  + +      G+ +L+Y  NS  K    P P+ P  D+FD+      +++  + ++A+   P   V F+
Sbjct:  160 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPN---TPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDR------SKNFTYRITAAMGSPKPPVKFN 344          

HSP 2 Score: 23.8682 bits (50), Expect = 6.713e-18
Identity = 7/17 (41.18%), Postives = 12/17 (70.59%), Query Frame = 3
Query:   54 DGDITILIGDWYTEEPH 104
            DG+I +L+ DW+ +  H
Sbjct:  134 DGEINLLLSDWWHQSIH 150          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.474e-17
Identity = 61/168 (36.31%), Postives = 92/168 (54.76%), Query Frame = 1
Query:  130 PGKGLGMPDGVLINGKGPY------QYNTTLVPDGIDYET------IEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTS-LDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY-TNSKGK-ARGPLPEGPN-DEFDKT 585
            P + +G P  +L+NG+G +      +Y++ L P  +            V P KTYRIR+ +     +LNF I NH LL+ E +G+Y VQ  YTS +DI+ G+SYS L+T DQN S +Y++    R  + +      G+ +L+Y  NS  K    P PE P  D+FD++
Sbjct:  190 PIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSEPCAPYIFHVMPKKTYRIRIASTTALAALNFAIGNHPLLVVEADGNY-VQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPN---TPPGLTLLNYLPNSVSKLPTSPPPETPAWDDFDRS 353          

HSP 2 Score: 23.8682 bits (50), Expect = 1.474e-17
Identity = 7/17 (41.18%), Postives = 12/17 (70.59%), Query Frame = 3
Query:   54 DGDITILIGDWYTEEPH 104
            DG+I +L+ DW+ +  H
Sbjct:  164 DGEINLLLSDWWHQSIH 180          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 58/167 (34.73%), Postives = 87/167 (52.10%), Query Frame = 1
Query:  130 PGKGLGMPDGVLINGKGPY------QYNTTLVPDGIDYET------IEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHY-TNSKGKAR-GPLPEGPN-DEFDKT 585
            P + +G P  +LINGKG +      +YN  L    +  +       + V P KTYRIR+ +     SLNF I NH LL+ E +G+Y      + +DI+ G+SYS L+T DQN   +Y++    R       K   G+ +L+Y  NS  K    P PE P+ ++FD++
Sbjct:  195 PMRWIGEPQSILINGKGQFDCSIAAKYNQGLKQCELSGKEKCAPFILHVQPKKTYRIRIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIGVR---ARLPKTPPGLTLLNYLPNSASKLPISPPPETPHWEDFDRS 358          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 6.798e-13
Identity = 50/180 (27.78%), Postives = 76/180 (42.22%), Query Frame = 1
Query:   94 RNHTASEKDTLMPGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESQWKRVTGVAILHYTNS---KGKARG------PLPEGPNDEFDKTFSMNQAR 606
            RN     K     G    + D   ING+    Y  +            + PG+T ++RV N G++  L F + NH   + ET+ +YT       + I  GQ+ + L+T +Q     YY+ A A     + +   T  AIL Y N+   +G+ RG      P+  G ND    T   N+ R
Sbjct:  171 RNPMDVLKQAQFTGAAANVSDAYTINGQPGDLYRCSRAGT----IRFPIFPGETVQLRVINAGMNQELFFSVANHQFTVVETDSAYTKPFTTNVIMIGPGQTTNVLLTANQRPGR-YYMAARAYNSANAPFDNTTTTAILQYVNAPTRRGRGRGQIAPVFPVLPGFNDTATATAFTNRLR 345          

HSP 2 Score: 31.9574 bits (71), Expect = 6.798e-13
Identity = 15/34 (44.12%), Postives = 18/34 (52.94%), Query Frame = 3
Query:    9 IINNRAIIPIPFDTPDGDITILIGDWYTEEPHGV 110
            II  R   P PF  P  DI IL+G+W+   P  V
Sbjct:  143 IIYPRLGSPYPFSMPKRDIPILLGEWWDRNPMDV 176          
BLAST of CF504648 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 5.502e-12
Identity = 46/156 (29.49%), Postives = 68/156 (43.59%), Query Frame = 1
Query:  115 KDTLMPGKGLGMPDGVLINGKGPYQYNTTLVPDGIDYETIEVHPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVT-MDQNASTDYYIVASARFVNE-SQWKRVTGVAILHYTNSKGKARG----PLPEGP 564
            K  L  G G  + D    NG     YN +   D      + V PGKTY +R+ N  ++  L F + NH L++ + + SY      T+L I  GQ+   L+T    N  +  + +A A + N    +   T VA+L Y  +   A      PLP  P
Sbjct:  143 KQALQTGGGPNVSDAYTFNGLPGPTYNCSSSNDTFK---LRVRPGKTYLLRLINAALNDELFFGVANHTLMVVQADASYVKPFAATALVISPGQTMDVLLTAAANNPPSRSFAIAVAPYTNTVGTFDNTTAVAVLEYYGAATSAAALRSLPLPSLP 295          

HSP 2 Score: 28.4906 bits (62), Expect = 5.502e-12
Identity = 8/27 (29.63%), Postives = 16/27 (59.26%), Query Frame = 3
Query:   30 IPIPFDTPDGDITILIGDWYTEEPHGV 110
            +  PF  P  ++ +L+G+W+  +P  V
Sbjct:  115 VAYPFPKPHREVPLLLGEWFNADPEAV 141          
The following BLAST results are available for this feature:
BLAST of CF504648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SKU5_ARATH4.116e-10284.78Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS2_ARATH2.511e-7471.20Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH1.759e-7270.11Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
ASOL_BRANA3.974e-4645.11L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC3.396e-4044.38L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
ASO_CUCPM6.713e-1832.82L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA1.474e-1736.31L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCSA7.259e-1634.73L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
LAC3_ARATH6.798e-1327.78Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=... [more]
LAC11_ORYSJ5.502e-1229.49Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-137 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504648 ID=CF504648; Name=CF504648; organism=Citrus sinensis; type=EST; length=737bp
GTGGCTTTATAATTAACAACCGGGCTATTATTCCAATTCCTTTTGATACC
CCAGATGGGGATATTACAATTTTGATTGGCGATTGGTACACCGAGGAACC
ACACGGCGTCTGAGAAAGACACCTTGATGCCTGGGAAAGGTCTAGGAATG
CCAGATGGGGTGCTAATCAATGGGAAAGGCCCTTACCAATATAACACTAC
ACTTGTTCCTGATGGCATTGATTATGAAACGATTGAAGTCCATCCAGGGA
AAACTTATCGCATTCGCGTGCACAATGTTGGAATATCAACTTCTCTGAAT
TTCAGGATCCAAAACCATAATCTACTTCTAGCAGAGACAGAGGGATCATA
TACAGTGCAACAGAATTATACTAGCTTAGATATACACGTAGGACAATCTT
ATTCGTTTTTGGTAACCATGGATCAAAATGCTAGTACTGATTATTACATT
GTTGCAAGCGCAAGGTTTGTGAATGAATCACAATGGAAAAGAGTTACTGG
TGTTGCCATCTTGCACTATACAAATTCCAAAGGAAAGGCACGCGGTCCCC
TCCCAGAAGGACCAAATGATGAATTTGACAAAACCTTCTCCATGAACCAA
GCAAGATCCATCAGATGGAATGTATCTGCAAGTGGTGCCCGTCCAATCCA
CAGGGTTCTTTTCGATATGGCTCAATCAATGTGACTGAAGTTTATGTGTT
GAGAAACAGCCACCAGAATGATTGACGGAAAGCGGCG
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