CF504676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_SYNY3 (ATP-dependent DNA helicase recG OS=Synechocystis sp. (strain PCC 6803) GN=recG PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.574e-16 Identity = 42/105 (40.00%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQR-FQDYSCGLLHGKMKSDQKDEAL 325 LAL L+GD+ ++QI +LPPGR PI T +I E+ +Y+++ E+ G +VY+++P IE+SE+L ++AA + + ++++ F +++ GLLHG++KS +K+ AL Sbjct: 568 LALTLHGDLEVSQIDELPPGRQPIHTSVITAKER--PQMYELIRREVAQGRQVYIIFPAIEESEKL-DIKAAVEEHKYLTEKIFPNFNIGLLHGRLKSAEKEAAL 669
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_AQUAE (ATP-dependent DNA helicase recG OS=Aquifex aeolicus GN=recG PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.065e-15 Identity = 44/100 (44.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQK 313 LAL++YGD+ ++ I +LPPGR + T + ++K E VYK + +EL+ G KVY++YP IE+SE+L L+AA + E + F D LLHGKM +K Sbjct: 525 LALSIYGDLDISIIDELPPGRKEVITKLYFESQK--EEVYKKVEEELKKGNKVYVIYPLIEESEKL-NLKAATEEYERWKKLFPDRKVLLLHGKMPDKEK 621
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAES (ATP-dependent DNA helicase recG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=recG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.379e-12 Identity = 36/104 (34.62%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PIKT + + Y+ V M +EL+ G + Y++ P IE SE L ++ + E++ + + GLLHGKM ++ KD+ + Sbjct: 422 LAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQ--YDQVLAQMSNELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQSDYGNEKVGLLHGKMSAEDKDQVM 523
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAEQ (ATP-dependent DNA helicase recG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=recG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 36/104 (34.62%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PIKT + + Y+ V M +EL+ G + Y++ P IE SE L ++ E++ + + GLLHGKM ++ KD+ + Sbjct: 422 LAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQ--YDQVLAQMSNELKKGRQAYVICPLIESSEHLEDVQNVVELYESLQSDYGNEKVGLLHGKMTAEDKDQVM 523
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAAW (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain MW2) GN=recG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PI T + + Y+ V M EL+ G + Y++ P IE SE L ++ + E++ Q + GLLHGK+ +D+KDE + Sbjct: 426 LAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQ--YDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVM 527
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAAS (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain MSSA476) GN=recG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PI T + + Y+ V M EL+ G + Y++ P IE SE L ++ + E++ Q + GLLHGK+ +D+KDE + Sbjct: 426 LAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQ--YDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVM 527
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAAR (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain MRSA252) GN=recG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PI T + + Y+ V M EL+ G + Y++ P IE SE L ++ + E++ Q + GLLHGK+ +D+KDE + Sbjct: 426 LAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQ--YDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVM 527
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAAN (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain N315) GN=recG PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PI T + + Y+ V M EL+ G + Y++ P IE SE L ++ + E++ Q + GLLHGK+ +D+KDE + Sbjct: 426 LAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQ--YDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVM 527
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAAM (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=recG PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PI T + + Y+ V M EL+ G + Y++ P IE SE L ++ + E++ Q + GLLHGK+ +D+KDE + Sbjct: 426 LAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQ--YDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVM 527
BLAST of CF504676 vs. ExPASy Swiss-Prot
Match: RECG_STAAC (ATP-dependent DNA helicase recG OS=Staphylococcus aureus (strain COL) GN=recG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.353e-12 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 14 LALALYGDMSLTQITDLPPGRIPIKTYIIEGNEKGYENVYKMMLDELQSGGKVYLVYPGIEQSEQLPQLRAAASDLETISQRFQDYSCGLLHGKMKSDQKDEAL 325 LA++++G+M ++ I LP GR PI T + + Y+ V M EL+ G + Y++ P IE SE L ++ + E++ Q + GLLHGK+ +D+KDE + Sbjct: 426 LAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQ--YDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVM 527 The following BLAST results are available for this feature:
BLAST of CF504676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504676 ID=CF504676; Name=CF504676; organism=Citrus sinensis; type=EST; length=325bpback to top |