CF509201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.839e-41 Identity = 97/217 (44.70%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 70 MRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAFSGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEM 720 M ++ L + ++IDTEFP LR T ++A E Y D+ F+VD LIQLG+TL D G+I T+E NFSDF + D SI+ L+ +GLD KIR++GI F L K R N+ WVTFHG YD+AYL+K FT +ALP T+E FS A SV+D+KV+AG C A + R G AHHAGS++ LTA VFA++ Sbjct: 1 MSLIEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIGGTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRC-EGLSSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana GN=CAF1-5 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.557e-39 Identity = 101/228 (44.30%), Postives = 133/228 (58.33%), Query Frame = 1 Query: 43 VWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGK-ISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAF-SGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEM 720 VW N + M + L N ++IDTEFPG L+ TP +A Y D+KFNVD THLIQLG+TL GK I+ T+E N SDF+ K L SI LK++GLD DKIR++GI F F + L++ ++WVTF G YD AYL+K T LP T++ F V L + V+D+K +AG C A +L ++R G AHHAGSDS LTA VF ++ Sbjct: 5 VWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLIQLGLTLF---GKGITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLC-SGLSSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.457e-37 Identity = 101/228 (44.30%), Postives = 126/228 (55.26%), Query Frame = 1 Query: 43 VWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFT-NDALPPTAEAF-SGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEM 720 VW N E+ M + L + ++IDTEFPG L+ TP +A Y D+KFNVD THLIQLG TL D G + T+E N SDFD K SI LK +GL+ DKIR++GI F F + L++ + WV F G YD AYLVK T LP T E F V L + VFD+K +A C A +L +KR G AHHAGSDS LTA VF ++ Sbjct: 9 VWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESC-SGLSSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 234
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.240e-37 Identity = 101/228 (44.30%), Postives = 126/228 (55.26%), Query Frame = 1 Query: 43 VWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFT-NDALPPTAEAF-SGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEM 720 VW N E+ M + L F+ ++IDTEFPG L+ TP +A Y D+KFNVD THLIQLG TL D G I+ T+E N SDF+ K SI LK +GL+ DKI ++GI F F + L + + WV F G YD AYLVK T LP T E F V L + VFD+K +A C A +L +KR G AHHAGSDS LTA VF ++ Sbjct: 4 VWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESC-SGLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 229
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.182e-35 Identity = 93/245 (37.96%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 34 ILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTP----RNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKIS---------YTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAFSGVAALFF-QSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRH-GGAHHAGSDSLLTAAVFAEMK 723 I +VW N E + ++ + +S+DTEFPG + R YN LK NVD LIQ+G+TLSD +G + Y +EFNF DFD+++D HA DSI+LL+ G+DF++ R++G+ FA + E++ WVTFH YD YLVKI T LP F G+ FF V+D+K + +C AR L V R G H AGSDSLLT F M+ Sbjct: 14 IRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFC--EQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMR 256
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.359e-34 Identity = 90/239 (37.66%), Postives = 125/239 (52.30%), Query Frame = 1 Query: 43 VWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFL-RNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---------SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAFSGV-AALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRH-GGAHHAGSDSLLTAAVFAEMK 723 VW EN E + ++++ + +S+DTEFPG + ++ R + Y LK NVD LIQ+G+TLSD G + + +EFNF DFD+ +D HA DSI+LL+ G+DF++ +DG+ FA + E + WVTFH YD YL+KI T LP F V LF + V+D+K + +C AR L V R G H AGSDSLLT F M+ Sbjct: 22 VWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFC--ERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMR 258
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.359e-34 Identity = 89/247 (36.03%), Postives = 133/247 (53.85%), Query Frame = 1 Query: 31 KILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPG--------FLRNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKISYT--------FEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAFSGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEMK 723 +I VW +N E M + ++++ F +++DTEFPG F NT + Y LK NV+ +IQLG+T SD +G + ++FNF +FDL+ D++A DSI+LL+ SG+DF K + GI FA + EN+ WVTFH YD YL+K+ T LP T F + +++F V+DIK + +C A +L+V+R G H AGSDSLLT+ F +++ Sbjct: 11 QIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYH------YETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVYDIKHLMKFC---NSLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQ 248
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.144e-32 Identity = 86/240 (35.83%), Postives = 127/240 (52.92%), Query Frame = 1 Query: 31 KILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRN--APAVESYNDLKFNVDCTHLIQLGITLSDNEGKISYT-------FEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAFSGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEMK 723 +I VW +N + M + +++ F +++DTEFPG + + A Y LK NV+ +IQLG+T S+ +G + ++FNF +FDL D+ A DSI+LLK SG+D K DGI FA + EN+ WVTFH YD YL+K+ T LP + F + ++F +V+DIK + +C A +L V+R G H AGSDSLLT+ F ++K Sbjct: 11 QIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFC---NSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLK 247
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.144e-32 Identity = 83/229 (36.24%), Postives = 127/229 (55.46%), Query Frame = 1 Query: 43 VWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPR--CVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAFSGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEMK 723 VW N + M + + L F +++ DTE+PG + T ++ + E Y +K NV+ T LIQ G TL + +G+I +E NFS+F D SI+ L+ GLD KIR +G+ F P+ + + + ++++++VTF G YD AY + I + LP T F+ F V+D KV+AG+C A++L + R G AHHAGSDSL+TA VF ++K Sbjct: 12 VWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMFGYGFFPKLMT-VFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQVYDTKVMAGFC-EGLGEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLK 238
BLAST of CF509201 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.106e-32 Identity = 83/236 (35.17%), Postives = 128/236 (54.24%), Query Frame = 1 Query: 31 KILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNT--PRNAPAVESYNDLKFNVDCTHLIQLGITLSDNEGKI---SYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCVFAPRFLEGLSKHRENLKWVTFHGLYDVAYLVKIFTNDALPPTAEAFSGVAALFFQSVFDIKVVAGYCXXXXXXXXXXXXXARILNVKRHGGAHHAGSDSLLTAAVFAEMK 723 +I VW N + M+ + +++ +N +++DTEFPG + + A Y L+ NVD +IQLG+T + +G+ + T++FNF F+L +D++A DSI+LL SG+ F K ++GI FA F+ E +KW++FH YD YL+KI TN LP + F + LFF ++D+K + C A L ++R G H AGSDSLLT F +M+ Sbjct: 11 RICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFK-FNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFFPVIYDVKYLMKSC---KNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMR 242 The following BLAST results are available for this feature:
BLAST of CF509201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509201 ID=CF509201; Name=CF509201; organism=Citrus sinensis; type=EST; length=725bpback to top |