CF509264

Overview
NameCF509264
Unique NameCF509264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length376
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.278e-36
Identity = 77/105 (73.33%), Postives = 86/105 (81.90%), Query Frame = 3
Query:   60 MRKWTIPSIXXXXXXXXXIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            MRKWT+PS+            QGR I A AE +SD  VDPPKVE+K+GAVPNGLSTDSDVAKREAES+S R+LR++AEKFEFQAEVSRLMDIIINSLYSNKDIFL
Sbjct:    1 MRKWTVPSVLFLLCPSLSSSCQGRKIHANAEADSDAPVDPPKVEDKIGAVPNGLSTDSDVAKREAESMSMRNLRSDAEKFEFQAEVSRLMDIIINSLYSNKDIFL 105          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.607e-32
Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 3
Query:   60 MRKWTIPSIXXXXXXXXXIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            MRKW +            +PD  + +Q  AE+ SD++ D PKVEEKLGAVP+GLSTDS+V +RE+ESIS+++LRN+AEKFEFQAEVSRLMDIIINSLYSNKDIFL
Sbjct:    1 MRKWALSCALLLVLLLTTLPDPAKKLQVNAEESSDEVGDFPKVEEKLGAVPHGLSTDSEVVQRESESISRKTLRNSAEKFEFQAEVSRLMDIIINSLYSNKDIFL 105          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 9.906e-32
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 3
Query:   60 MRKWTIPSIXXXXXXXXXIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            MRK T+ S+         +PDQGR + A AE+ SD + DPPKVEEK+G    GLSTDSDV  RE+ES+SK++LR+NAEKFEFQAEVSRLMDIIINSLYSNKDIFL
Sbjct:    1 MRKRTLVSVLFLFSLLFLLPDQGRKLHANAEESSDDVTDPPKVEEKIGG-HGGLSTDSDVVHRESESMSKKTLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 104          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_PIG (Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 5.111e-12
Identity = 44/85 (51.76%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  144 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            +AEDE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFL
Sbjct:   20 RAEDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFL 101          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  144 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFL
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFL 101          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  144 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFL
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFL 101          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  144 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFL
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFL 101          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  144 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFL
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFL 101          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  144 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFL
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFL 101          
BLAST of CF509264 vs. ExPASy Swiss-Prot
Match: ENPL_CANFA (Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 3
Query:  144 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFL 374
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFL
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFL 101          
The following BLAST results are available for this feature:
BLAST of CF509264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ENPL_CATRO2.278e-3673.33Endoplasmin homolog OS=Catharanthus roseus GN=HSP9... [more]
ENPL_HORVU2.607e-3264.76Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1[more]
ENPL_ARATH9.906e-3266.67Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD... [more]
ENPL_PIG5.111e-1251.76Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3[more]
ENPL_RAT1.139e-1150.59Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_PONAB1.139e-1150.59Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_MOUSE1.139e-1150.59Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_MACFA1.139e-1150.59Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN1.139e-1150.59Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_CANFA1.139e-1150.59Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-771 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-76_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509264 ID=CF509264; Name=CF509264; organism=Citrus sinensis; type=EST; length=376bp
AATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTATACTAATTTCA
AAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTGCTTCTCCTTTT
CCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACAGGCAAAAGCAG
AGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCGAGGAGAAACTC
GGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTGGCAAAGAGGGA
AGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGCGGAGAAATTTG
AATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCATCAATTCTCTT
TACAGCAACAAAGATATTTTCCTCAG
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