CF509361

Overview
NameCF509361
Unique NameCF509361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN2_ARATH (Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis thaliana GN=MAN2 PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 1.784e-99
Identity = 160/212 (75.47%), Postives = 182/212 (85.85%), Query Frame = 3
Query:    3 QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIETATK 638
            +FDERVFKALDHVI EA+ +GVRLLLSLVNNLQAYGGKTQYVNWAW+EG+G+            I +YFK+Y+  +LTRKN++TG+EYRNDPTIFAWELINEPRCMSD SGDTLQDWI+EM+AF+KSID KHL+TVGLEGFYGP SPK+LTVNPE WAS LGSDF+RNS++ NIDFASVHIYPDHWFHD  FE+ LKFV KWMLSHIE   K
Sbjct:  114 RFDERVFKALDHVIAEAKTHGVRLLLSLVNNLQAYGGKTQYVNWAWQEGVGLSSSNDSFFFDPSIRRYFKNYLTVLLTRKNSLTGIEYRNDPTIFAWELINEPRCMSDVSGDTLQDWINEMTAFIKSIDNKHLLTVGLEGFYGPSSPKKLTVNPERWASELGSDFVRNSDSPNIDFASVHIYPDHWFHDQGFEEKLKFVVKWMLSHIEDGDK 325          

HSP 2 Score: 35.8094 bits (81), Expect = 1.784e-99
Identity = 15/18 (83.33%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  626 DGDKELNKPVFFTEYGLS 679
            DGDKEL KPV FTE+GLS
Sbjct:  322 DGDKELKKPVLFTEFGLS 339          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN5_ARATH (Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis thaliana GN=MAN5 PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.649e-94
Identity = 154/212 (72.64%), Postives = 176/212 (83.02%), Query Frame = 3
Query:    3 QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIETATK 638
            +FDERVF+ALDHVI EARK+ VRLLLSLVNNLQAYGGKTQYV WAW+EG+G+            I  YFK+Y+K +LTRKN++TG+EYRNDPTIFAWELINEPRC +D SG TLQDWIDEM+ F+KSID KHL+TVGLEGFYGP SPK LTVNPE WAS LG+DF++NSN+ NIDFASVHIYPDHWFH+  FE+ LKFV KWM SHIE   K
Sbjct:  113 RFDERVFQALDHVIAEARKHDVRLLLSLVNNLQAYGGKTQYVKWAWQEGVGLSSSNDSFFFDPSIRNYFKNYLKVLLTRKNSVTGIEYRNDPTIFAWELINEPRCTTDVSGKTLQDWIDEMTGFIKSIDDKHLLTVGLEGFYGPNSPKGLTVNPEQWASQLGTDFVQNSNSSNIDFASVHIYPDHWFHNQTFEEKLKFVVKWMQSHIEDGLK 324          

HSP 2 Score: 31.9574 bits (71), Expect = 1.649e-94
Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  626 DGDKELNKPVFFTEYGLS 679
            DG KEL KPV FTE+GLS
Sbjct:  321 DGLKELKKPVLFTEFGLS 338          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN2_ORYSJ (Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa subsp. japonica GN=MAN2 PE=2 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 1.669e-76
Identity = 129/209 (61.72%), Postives = 160/209 (76.56%), Query Frame = 3
Query:    6 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGP-KSPKRLTVNPEMW-ASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIE 626
            FDERVFKALD V+ EA ++GVRL+LSL NNL AYGGK QYV WAWEEG+G+            I  YFK Y+KT+L RKN +TG+EYR+DPTI AWEL+NEPRC SDPSGDTLQ W++EMSA+VKSIDKKHL+TVG EGFYGP  S ++L +NP  W  +  G+DFIRNS   +IDFASVH+YPD+W      ++ LKF+T+W+ +H+E
Sbjct:  127 FDERVFKALDRVVAEASEHGVRLILSLANNLDAYGGKRQYVRWAWEEGVGLTASNDSFFFDPAIRDYFKVYLKTLLMRKNHLTGLEYRDDPTILAWELMNEPRCTSDPSGDTLQRWMEEMSAYVKSIDKKHLLTVGTEGFYGPTSSQEKLNINPGEWFPNNYGADFIRNSKIQDIDFASVHVYPDNWLQHASLDEKLKFMTRWITAHVE 335          

HSP 2 Score: 30.4166 bits (67), Expect = 1.669e-76
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  626 DGDKELNKPVFFTEYGLS 679
            DGD EL KPV  TE+GLS
Sbjct:  336 DGDGELEKPVLVTEFGLS 353          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN6_ARATH (Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana GN=MAN6 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.635e-62
Identity = 113/209 (54.07%), Postives = 142/209 (67.94%), Query Frame = 3
Query:    6 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIETA 632
            +DE VFKALD V+ EARK  +RL+LSLVNN  AYGGK QYV W    G+ +            +  +++ +V+TVL R NT T + Y+NDPTIFAWEL+NEPRC SDPSGD LQ WI EM+ FVKS+D KHLV +GLEGFYGP +P R   NP  +A+ +G+DFIRN+    IDFASVH+YPD W         L+F + WM +H+E A
Sbjct:  120 YDEEVFKALDFVLSEARKYKIRLILSLVNNWDAYGGKAQYVKWGNASGLNLTSDDDFFTNPT-LRNFYQSHVRTVLNRVNTFTNITYKNDPTIFAWELMNEPRCPSDPSGDKLQSWIQEMAVFVKSLDAKHLVEIGLEGFYGPSAPARTRFNPNPYAAQVGTDFIRNNQVLGIDFASVHVYPDSWISPAVSNSFLEFTSSWMQAHVEDA 327          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN6_ORYSJ (Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica GN=MAN6 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 2.518e-59
Identity = 107/207 (51.69%), Postives = 143/207 (69.08%), Query Frame = 3
Query:    3 QFDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHI 623
            +F E VF+ LD+VI EAR+N +RL+L LVNNL   GGK QYV WA   G  +            I +Y+K YVK +LTR+N+ + + Y ++P IFAWEL+NEPRC+S+ SG  LQ WI EM+A+VKS+D  HLVTVG EGFYGP   +RL VNP  WA++L SDFI+NS  ++IDFASVH YPD W      E+ +++++ W+ SH+
Sbjct:  123 RFSEAVFQVLDYVIYEARRNHIRLILCLVNNLDNLGGKAQYVQWAQAAGANMTNSTDSFYSHPTIKRYYKDYVKAILTRRNSYSRIRYSDEPAIFAWELMNEPRCVSNSSGPYLQAWIAEMAAYVKSLDTNHLVTVGTEGFYGPGIAERLGVNPGEWAASLCSDFIQNSAVEHIDFASVHAYPDSWLPRASLEEKVRYLSNWVDSHL 329          

HSP 2 Score: 22.7126 bits (47), Expect = 2.518e-59
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  626 DGDKELNKPVFFTEYG 673
            D ++ L KPV FTE G
Sbjct:  331 DSEQILKKPVLFTEVG 346          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN7_ORYSJ (Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa subsp. japonica GN=MAN7 PE=2 SV=3)

HSP 1 Score: 225.713 bits (574), Expect = 1.871e-58
Identity = 108/209 (51.67%), Postives = 142/209 (67.94%), Query Frame = 3
Query:    6 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIETA 632
            +DE VF+ALD V+ EAR++ +RL+LSL NN + YGGK QYV W  E G+ +            I  Y+K +V+ V+TR NT+T   Y++DPTI AWELINEPRC SDPSGDTLQ W++EM+++VKSID  HL+ +G+EGFYGP  P+ L VNP+ ++   G DFIRN     ID AS+H+Y D W      E+ L+FV KWM  HI+ A
Sbjct:   81 YDEDVFRALDFVVSEARRHNMRLILSLCNNWEDYGGKAQYVRWGKEAGLDLTSEDDFFSDPT-IKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTLQAWMEEMASYVKSIDPVHLLEIGIEGFYGPSIPELLPVNPDEYSGHAGIDFIRNHQAPGIDLASIHVYSDIWLPQSIKENHLQFVDKWMQQHIDDA 288          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN8_ORYSJ (Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa subsp. japonica GN=MAN8 PE=2 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.213e-57
Identity = 107/209 (51.20%), Postives = 142/209 (67.94%), Query Frame = 3
Query:    6 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIETA 632
            +DE VF+ALD V+ EA+++ +RL+LSL NN + YGGK QYV W  E G+ +            I  Y+K +V+ V+TR NT+T   Y++DPTI AWELINEPRC SDPSGDTLQ WI+EM+++VKSID  HL+ +G+EGFYG  +P+ L VNP+ ++   G+DFIRN     ID AS+H+Y D W      E+ L+FV KWM  HI  A
Sbjct:   74 YDEDVFQALDFVVSEAKRHNMRLILSLCNNWEDYGGKAQYVRWGKEAGLDLTSEDDFFSDPT-IKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGIEGFYGLSTPELLPVNPDEYSGHAGTDFIRNHQAPGIDLASIHVYSDTWLPHSIKENHLQFVDKWMQQHIHDA 281          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN1_ORYSJ (Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa subsp. japonica GN=MAN1 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.027e-56
Identity = 110/210 (52.38%), Postives = 145/210 (69.05%), Query Frame = 3
Query:    6 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRL-TVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIETA 632
            ++E  FK LD V+ EARK G++++LSLV+N  ++GG+ QYVNWA  +G GI            +  ++K++VKTVLTRKNTITGV YR+DPTI AWEL+NEPRC SD SG T+Q WI EM+A VKSID+ H++ VGLEGFYG  SP R+  VNP  +   LG+DFI N+    IDFA+VH YPD W    + +  L F+ +W+ +HI  A
Sbjct:  111 YNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQGQGIGSDDEFFTNPV-VKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGY--QLGTDFIANNQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADA 317          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN5_ORYSJ (Putative mannan endo-1,4-beta-mannosidase 5 OS=Oryza sativa subsp. japonica GN=MAN5 PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.692e-56
Identity = 112/211 (53.08%), Postives = 134/211 (63.51%), Query Frame = 3
Query:    6 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKS-PKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWF-HDLEFEDDLKFVTKWMLSHIETA 632
            +DE VFKALD V+ EARK+ +RL+L L+NN   YGGK QYV WA     G             +  YFK +V  VLTR N  TGV YR+DPTI AWEL+NEPRC SDP+GDTLQ WI EM+  VKS+D  HL+ VG EGFYGP S P RL VNP    +  G+DF+RN     +DFASVH+YPD W       E  L+F T W+ +HI  A
Sbjct:  151 YDEEVFKALDFVVSEARKHKIRLILPLINNWDDYGGKAQYVRWAQAAAAGAGADAFFSDET--VRGYFKSHVTAVLTRVNAYTGVAYRDDPTIMAWELMNEPRCASDPTGDTLQAWIAEMAFHVKSVDPAHLLGVGAEGFYGPSSPPARLRVNPNADVALAGADFVRNHRVLGVDFASVHVYPDTWLPAGATKEAQLRFATSWVEAHIADA 359          
BLAST of CF509361 vs. ExPASy Swiss-Prot
Match: MAN3_ARATH (Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis thaliana GN=MAN3 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.091e-53
Identity = 95/209 (45.45%), Postives = 141/209 (67.46%), Query Frame = 3
Query:    6 FDERVFKALDHVIVEARKNGVRLLLSLVNNLQAYGGKTQYVNWAWEEGIGIXXXXXXXXXXXXIHKYFKHYVKTVLTRKNTITGVEYRNDPTIFAWELINEPRCMSDPSGDTLQDWIDEMSAFVKSIDKKHLVTVGLEGFYGPKSPKRLTVNPEMWASALGSDFIRNSNNDNIDFASVHIYPDHWFHDLEFEDDLKFVTKWMLSHIETA 632
            +DE+ F+ LD  I EA++ G++++++ VNN   +GG+ QYV+WA   G  +            + +Y+K++VKT++ R NT T VEY+++PTI  WEL+NEP+C +DPSG TL  W++EM+ +VKS+D KHL++ GLEGFYG  SP+R T    + A+ LG+DFI N   D IDFAS+H YPD WF +L+ +  L  + KW+  H+E A
Sbjct:  104 YDEKTFQGLDFAIAEAKRLGIKMIITFVNNYSDFGGRKQYVDWAKNTGQNVSSDDDFYTNPL-VKQYYKNHVKTMVNRVNTFTKVEYKDEPTIMGWELMNEPQCRADPSGKTLTAWMNEMALYVKSVDSKHLLSTGLEGFYGDSSPQRKTSLNPVAANVLGTDFIANHKLDAIDFASIHSYPDLWFPNLDEKSRLNLLRKWLECHLEDA 311          
The following BLAST results are available for this feature:
BLAST of CF509361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
MAN2_ARATH1.784e-9975.47Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis ... [more]
MAN5_ARATH1.649e-9472.64Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis ... [more]
MAN2_ORYSJ1.669e-7661.72Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa... [more]
MAN6_ARATH1.635e-6254.07Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis ... [more]
MAN6_ORYSJ2.518e-5951.69Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa... [more]
MAN7_ORYSJ1.871e-5851.67Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa... [more]
MAN8_ORYSJ1.213e-5751.20Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa... [more]
MAN1_ORYSJ1.027e-5652.38Mannan endo-1,4-beta-mannosidase 1 OS=Oryza sativa... [more]
MAN5_ORYSJ8.692e-5653.08Putative mannan endo-1,4-beta-mannosidase 5 OS=Ory... [more]
MAN3_ARATH3.091e-5345.45Mannan endo-1,4-beta-mannosidase 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-868 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-77_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509361 ID=CF509361; Name=CF509361; organism=Citrus sinensis; type=EST; length=706bp
GGCAATTTGATGAGCGAGTCTTCAAAGCCTTGGATCATGTCATTGTTGAA
GCAAGGAAAAATGGAGTTCGACTTCTGCTTAGCTTAGTTAATAACTTGCA
AGCATATGGTGGAAAGACTCAGTACGTCAATTGGGCATGGGAAGAAGGAA
TTGGCATTAGCTCCTCTAACGATTCCTTCTTTTTTGATCCATCCATCCAC
AAATACTTCAAGCATTATGTCAAGACTGTACTCACAAGGAAGAACACCAT
CACAGGAGTTGAATACCGTAATGATCCAACCATCTTTGCATGGGAGCTGA
TTAATGAGCCTCGTTGCATGTCTGATCCTTCTGGTGACACTCTTCAAGAT
TGGATAGATGAAATGTCAGCTTTCGTGAAATCAATTGACAAGAAACATCT
TGTCACTGTGGGCCTTGAAGGATTCTATGGTCCTAAAAGTCCCAAGAGGT
TAACTGTTAACCCAGAAATGTGGGCCTCTGCTCTTGGATCTGATTTTATT
CGCAACTCCAATAATGATAACATTGATTTTGCTTCTGTTCATATCTACCC
TGATCATTGGTTTCATGATCTAGAATTTGAAGACGATTTGAAATTCGTCA
CCAAGTGGATGCTTTCTCACATTGAGACGGCGACAAAGAATTGAATAAGC
CTGTGTTTTTCACTGAATATGGATTGTCAACCTGATCAAGGCTTTGACCG
TCACTC
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