CF509455

Overview
NameCF509455
Unique NameCF509455
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length338
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 8.199e-51
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            LMFGGQMPV+KVGRMAGQFAKPRSD FEEKNGVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRA
Sbjct:  180 LMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLLRA 255

HSP 2 Score: 70.8626 bits (172), Expect = 8.199e-51
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            +AFLLQGGDCAESFKEFNANNIRDTFRILLQMG V
Sbjct:  145 RAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAV 179
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.085e-50
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            LMFGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRA
Sbjct:  179 LMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRA 254

HSP 2 Score: 70.8626 bits (172), Expect = 3.085e-50
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            +AFLLQGGDCAESFKEFNANNIRDTFRILLQMG V
Sbjct:  144 RAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAV 178
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 3.085e-50
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            LMFGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRA
Sbjct:  179 LMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRA 254

HSP 2 Score: 70.8626 bits (172), Expect = 3.085e-50
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            +AFLLQGGDCAESFKEFNANNIRDTFRILLQMG V
Sbjct:  144 RAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAV 178
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.261e-48
Identity = 66/76 (86.84%), Postives = 72/76 (94.74%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            LMFGGQ+PV+KVGRMAGQFAKPRSDPFEEK+GVKLPSYRGDN+NGDAFDEKSR PDP R++RAY QS ATLNLLRA
Sbjct:  142 LMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRA 217

HSP 2 Score: 70.8626 bits (172), Expect = 1.261e-48
Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            +AF+LQGGDCAESFKEFNANNIRDTFR+LLQMGVV
Sbjct:  107 QAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVV 141
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.791e-48
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            LMFGGQ+PV+KVGRMAGQFAKPRSDPFEE NGVKLPSY+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRA
Sbjct:  152 LMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRA 227

HSP 2 Score: 71.2478 bits (173), Expect = 2.791e-48
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            KAFLLQGGDCAESFKEFNANNIRDTFRILLQM VV
Sbjct:  117 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVV 151
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.368e-47
Identity = 66/76 (86.84%), Postives = 70/76 (92.11%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            LMFGGQ+PV+KVGRMAGQFAKPRSDP EE NGVKLPSY+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRA
Sbjct:  152 LMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRA 227

HSP 2 Score: 71.2478 bits (173), Expect = 1.368e-47
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            KAFLLQGGDCAESFKEFNANNIRDTFRILLQM VV
Sbjct:  117 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVV 151
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-46
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 1 
Query:  109 LMFGGQMPVVKV-GRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            LMFGGQMPVVKV GRMAGQFAKPRSD FEE++GVKLPSYRGDN+NGD FDEKSR PDPQR+IRAY QS ATLNLLRA
Sbjct:  168 LMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFDEKSRVPDPQRMIRAYAQSVATLNLLRA 244

HSP 2 Score: 69.707 bits (169), Expect = 1.934e-46
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            +AF+LQGGDCAESFKEFNANNIRDTFRILLQMG V
Sbjct:  133 RAFVLQGGDCAESFKEFNANNIRDTFRILLQMGAV 167
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 5.580e-46
Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 1 
Query:  103 LCLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            + L FGGQ+PV+KVGRMAGQFAKPRSD FEEK+GVKLPSY+GDN+NGD FDEKSR PDP R+IRAY QSAATLNLLRA
Sbjct:  163 IVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLLRA 240

HSP 2 Score: 68.1662 bits (165), Expect = 5.580e-46
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            KAFLLQGGDCAESFKEFNA NIRDTFR+LLQM +V
Sbjct:  130 KAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIV 164
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.268e-46
Identity = 64/76 (84.21%), Postives = 72/76 (94.74%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            L FGGQMPV+KVGRMAGQFAKPRS+ FEE++GVKLPSYRGDN+NGDAF+EKSR PDPQR++RAY QSAATLNLLRA
Sbjct:  185 LTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRMVRAYAQSAATLNLLRA 260

HSP 2 Score: 66.6254 bits (161), Expect = 7.268e-46
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            +AFLLQGGDCAESFKEFN NNIRDTFR+LLQM  V
Sbjct:  150 RAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAV 184
[Close]
BLAST of CF509455 vs. ExPASy Swiss-Prot
Match: AROF_STRCO (Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Streptomyces coelicolor GN=aroH PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 1.709e-27
Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 1 
Query:  109 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRA 336
            L +   +PVVKVGR+AGQ++KPRS P E ++GV LP+YRGD+VNG  F E +R PDP+RL R Y  SA+TLNL+RA
Sbjct:  100 LTYAASVPVVKVGRIAGQYSKPRSKPTETRDGVTLPTYRGDSVNGFDFTEAARIPDPERLKRMYHASASTLNLVRA 175

HSP 2 Score: 46.595 bits (109), Expect = 1.709e-27
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 3 
Query:    3 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 107
            +AFLLQGGDCAE+F   +A++IR+  + LLQMG V
Sbjct:   65 EAFLLQGGDCAEAFDAVSADHIRNKLKTLLQMGAV 99
The following BLAST results are available for this feature:
BLAST of CF509455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
AROF_TOBAC8.199e-5194.74Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC3.085e-5093.42Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU3.085e-5093.42Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH1.261e-4886.84Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC2.791e-4888.16Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU1.368e-4786.84Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ1.934e-4687.01Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ARATH5.580e-4682.05Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ORYSJ7.268e-4684.21Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_STRCO1.709e-2760.53Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-962 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-78_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509455 ID=CF509455; Name=CF509455; organism=Citrus sinensis; type=EST; length=338bp
GCAAAGCTTTCTTGCTTCAAGGCGGTGATTGCGCTGAGAGTTTCAAAGAG
TTTAATGCTAATAACATTCGTGACACTTTCAGAATCCTTCTCCAGATGGG
TGTTGTGCCTAATGTTCGGCGGTCAAATGCCCGTTGTTAAGGTGGGAAGA
ATGGCAGGGCAGTTTGCGAAGCCGAGATCAGATCCGTTTGAGGAGAAGAA
CGGAGTGAAGCTGCCGAGTTACAGAGGAGATAATGTGAACGGAGACGCGT
TTGATGAGAAATCAAGGAATCCTGATCCGCAGAGGTTGATCAGAGCTTAT
TGTCAGTCGGCTGCCACTTTGAATCTTCTCAGGGCTTT
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