CF509456

Overview
NameCF509456
Unique NameCF509456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: SIRT6_MOUSE (NAD-dependent deacetylase sirtuin-6 OS=Mus musculus GN=Sirt6 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.051e-42
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 1 
Query:  220 FRGPNGIWTLQREGKPLPEASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKET 519
            FRGP+G+WT++  G   P+    F  A P  THMALV+LE+ G L F++SQNVDGLH+RSG PR+KLAELHGN F+E CP C ++Y RD  V T+GLK T
Sbjct:   64 FRGPHGVWTMEERGLA-PKFDTTFENARPSKTHMALVQLERMGFLSFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECPKCKTQYVRDTVVGTMGLKAT 162

HSP 2 Score: 65.4698 bits (158), Expect = 2.051e-42
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 3 
Query:   30 MSLGYAEKLSYIEDVGNVGMAEFFDSPQNLQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            MS+ YA  LS   D G  G+ E FD P+ L+ K+ +LA+L+ +S  +V  TGAGIST+ GIPDF
Sbjct:    1 MSVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLMWQSSSVVFHTGAGISTASGIPDF 64
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: SIRT6_HUMAN (NAD-dependent deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.534e-42
Identity = 57/100 (57.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:  220 FRGPNGIWTLQREGKPLPEASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGLKET 519
            FRGP+G+WT++  G   P+    F  A P  THMALV+LE+ G+L+F++SQNVDGLH+RSG PR+KLAELHGN F+E C  C ++Y RD  V T+GLK T
Sbjct:   64 FRGPHGVWTMEERGLA-PKFDTTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKAT 162

HSP 2 Score: 66.2402 bits (160), Expect = 4.534e-42
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 3 
Query:   30 MSLGYAEKLSYIEDVGNVGMAEFFDSPQNLQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            MS+ YA  LS   D G  G+ E FD P+ L+ K+ +LA+L+ +S  +V  TGAGIST+ GIPDF
Sbjct:    1 MSVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDF 64
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: SIRT7_MOUSE (NAD-dependent deacetylase sirtuin-7 OS=Mus musculus GN=Sirt7 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 3.031e-30
Identity = 46/94 (48.94%), Postives = 66/94 (70.21%), Query Frame = 1 
Query:  220 FRGPNGIWTLQREGKPLPEASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSC--GSEYFRDFEV 495
            +RGPNG+WTL ++G+P+  A L    A P +THM++  L +  +++ V+SQN DGLHLRSG+PR  ++ELHGN ++E C SC    EY R F+V
Sbjct:  120 YRGPNGVWTLLQKGRPVSAADLS--EAEPTLTHMSITRLHEQKLVQHVVSQNCDGLHLRSGLPRTAISELHGNMYIEVCTSCIPNREYVRVFDV 211

HSP 2 Score: 51.6026 bits (122), Expect = 3.031e-30
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 3 
Query:   93 EFFDSPQNLQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            E  D P+ L+ K+ +LA  ++ ++HLVV+TGAGIST+  IPD+
Sbjct:   78 EVCDDPEELRRKVRELAGAVRSARHLVVYTGAGISTAASIPDY 120
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: SIRT7_BOVIN (NAD-dependent deacetylase sirtuin-7 OS=Bos taurus GN=SIRT7 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.923e-29
Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 1 
Query:  220 FRGPNGIWTLQREGKPLPEASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSC--GSEYFRDFEV 495
            +RGPNG+WTL ++G+ +  A L    A P +THM++  L +  +++ V+SQN DGLHLRSG+PR  ++ELHGN ++E C +C    EY R F+V
Sbjct:  119 YRGPNGVWTLLQKGRSVSAADLS--EAEPTLTHMSITRLHEQKLVQHVVSQNCDGLHLRSGLPRSAMSELHGNMYIEVCTACTPNREYVRVFDV 210

HSP 2 Score: 52.7582 bits (125), Expect = 1.923e-29
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 3 
Query:   93 EFFDSPQNLQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            E  D P+ LQ K+ +LA  ++ +K+LVV+TGAGIST+  IPD+
Sbjct:   77 EVCDDPEELQRKVRELASAVRNAKYLVVYTGAGISTAASIPDY 119
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: SIRT7_HUMAN (NAD-dependent deacetylase sirtuin-7 OS=Homo sapiens GN=SIRT7 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.527e-29
Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 1 
Query:  220 FRGPNGIWTLQREGKPLPEASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSC--GSEYFRDFEV 495
            +RGPNG+WTL ++G+ +  A L    A P +THM++  L +  +++ V+SQN DGLHLRSG+PR  ++ELHGN ++E C SC    EY R F+V
Sbjct:  119 YRGPNGVWTLLQKGRSVSAADLS--EAEPTLTHMSITRLHEQKLVQHVVSQNCDGLHLRSGLPRTAISELHGNMYIEVCTSCVPNREYVRVFDV 210

HSP 2 Score: 50.447 bits (119), Expect = 5.527e-29
Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 3 
Query:   93 EFFDSPQNLQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            E  D P+ L+ K+ +LA  ++ +K+LVV+TGAGIST+  IPD+
Sbjct:   77 EVCDDPEELRGKVRELASAVRNAKYLVVYTGAGISTAASIPDY 119
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD1_BRAJA (NAD-dependent deacetylase 1 OS=Bradyrhizobium japonicum GN=npdA1 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.423e-18
Identity = 40/109 (36.70%), Postives = 48/109 (44.04%), Query Frame = 1 
Query:  220 FRGPNGIWTLQREGKPLPEASL-------------------PFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDF 489
            FR P GIWT  R   P+P                        F  A PG  H AL  L +AG +  VI+QN+D LH  SG   E + ELHGN+    C  CG  Y  D+
Sbjct:   42 FRSPGGIWTRNR---PIPFDGFVASQEARDESWRRRFAMEETFAAARPGRGHRALASLYRAGKVPAVITQNIDNLHQASGFAHEHVIELHGNTTYARCVGCGQTYQLDW 147

HSP 2 Score: 46.2098 bits (108), Expect = 1.423e-18
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 3 
Query:  114 NLQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            +L+  +E+L  +I ++K +V FTGAGIST CGIPDF
Sbjct:    7 DLRSGVERLGDMIAEAKTIVPFTGAGISTECGIPDF 42
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_THEYD (NAD-dependent deacetylase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=npdA PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 3.521e-16
Identity = 38/102 (37.25%), Postives = 48/102 (47.06%), Query Frame = 1 
Query:  220 FRGPNGIWT-----------LQREG-----KPLPEASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEY 477
            FR PNG+W            + R+      K   E       A P   H AL ELEK G+LK+VI+QN+DGLH  +G   + + ELHGN     C  C   Y
Sbjct:   39 FRSPNGLWQRFRIVTYQEFIIDRKARNEFWKMKRELIQEIINAKPNNAHNALAELEKRGLLKYVITQNIDGLHQMAG--NKSVIELHGNQRGYICLDCEKVY 138

HSP 2 Score: 43.8986 bits (102), Expect = 3.521e-16
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 3 
Query:  123 EKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            EKI +  +LI+KS + V FTGAGIST  GIPDF
Sbjct:    7 EKISKTYELIKKSTYSVAFTGAGISTESGIPDF 39
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD2_PYRAE (NAD-dependent deacetylase 2 OS=Pyrobaculum aerophilum GN=npdA2 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.580e-16
Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 1 
Query:  220 FRGPNGIWTLQR-EGKPLPEASLP---------------FHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETI 504
            FRGP G+W   + E    PEA                   + A P   H A+ ELE  G+++ VI+QNVDGLH R+G     + ELHG+ +   C  CGS Y  D  VE +
Sbjct:   30 FRGPGGLWERYKPEELATPEAFARDPALVWRWYKWRQEVIYNARPSPGHYAIAELEAMGVVRGVITQNVDGLHQRAG--SRLVVELHGSIWRARCVKCGSVYILDKPVEEV 138

HSP 2 Score: 37.3502 bits (85), Expect = 4.580e-16
Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 3 
Query:  138 LAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            +A L+  S+H VVFTGAGIS   G+P F
Sbjct:    3 VADLLASSRHCVVFTGAGISAESGVPTF 30
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_SULAC (NAD-dependent deacetylase OS=Sulfolobus acidocaldarius GN=npdA PE=3 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 2.207e-15
Identity = 38/101 (37.62%), Postives = 48/101 (47.52%), Query Frame = 1 
Query:  220 FRGPNGIWTLQREG-------KPLPEASLPFH--------RAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEY 477
            FRGP G+W             +  P+A   F+         A P   H AL +LEK G++K VI+QNVDGLH  +G     + ELHGN     C SC   Y
Sbjct:   37 FRGPQGLWKKYSPELASIEYFQKYPDAFWQFYSTRMKSLFEAKPNRAHYALAQLEKMGLIKAVITQNVDGLHSVAG--SRNVIELHGNMRKSYCTSCLRSY 135

HSP 2 Score: 40.4318 bits (93), Expect = 2.207e-15
Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 3 
Query:  117 LQEKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            L E+ +++A++I  S + + FTGAGIST+ GIPDF
Sbjct:    3 LVEEAKKVAEMILSSVNAIAFTGAGISTASGIPDF 37
[Close]
BLAST of CF509456 vs. ExPASy Swiss-Prot
Match: NPD_FUSNN (NAD-dependent deacetylase OS=Fusobacterium nucleatum subsp. nucleatum GN=npdA PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.727e-15
Identity = 37/79 (46.84%), Postives = 44/79 (55.70%), Query Frame = 1 
Query:  274 EASLPFHRAMPGMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMEACPSCGSEYFRDFEVETIGL 510
            E  L      P   HMALVELEK GILK VI+QN+D LH  SG   + + ELHG+     C SCG    R+F  E  G+
Sbjct:   77 EKELNIKGLKPNKGHMALVELEKIGILKAVITQNIDDLHQVSG--NKNVLELHGSLKRWYCLSCGKTADRNFSCECGGV 153

HSP 2 Score: 38.891 bits (89), Expect = 3.727e-15
Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 3 
Query:  123 EKIEQLAKLIQKSKHLVVFTGAGISTSCGIPDF 221
            EKI +L K+++ +K+LV F GAG ST  G+ DF
Sbjct:    7 EKILELVKILKNTKYLVFFGGAGTSTDSGVKDF 39
The following BLAST results are available for this feature:
BLAST of CF509456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
SIRT6_MOUSE2.051e-4258.00NAD-dependent deacetylase sirtuin-6 OS=Mus musculu... [more]
SIRT6_HUMAN4.534e-4257.00NAD-dependent deacetylase sirtuin-6 OS=Homo sapien... [more]
SIRT7_MOUSE3.031e-3048.94NAD-dependent deacetylase sirtuin-7 OS=Mus musculu... [more]
SIRT7_BOVIN1.923e-2946.81NAD-dependent deacetylase sirtuin-7 OS=Bos taurus ... [more]
SIRT7_HUMAN5.527e-2947.87NAD-dependent deacetylase sirtuin-7 OS=Homo sapien... [more]
NPD1_BRAJA1.423e-1836.70NAD-dependent deacetylase 1 OS=Bradyrhizobium japo... [more]
NPD_THEYD3.521e-1637.25NAD-dependent deacetylase OS=Thermodesulfovibrio y... [more]
NPD2_PYRAE4.580e-1636.94NAD-dependent deacetylase 2 OS=Pyrobaculum aerophi... [more]
NPD_SULAC2.207e-1537.62NAD-dependent deacetylase OS=Sulfolobus acidocalda... [more]
NPD_FUSNN3.727e-1546.84NAD-dependent deacetylase OS=Fusobacterium nucleat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-963 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-78_E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509456 ID=CF509456; Name=CF509456; organism=Citrus sinensis; type=EST; length=530bp
CAACCTTGGTATTAGAGAAACCAACAGCCATGTCTTTAGGCTATGCAGAG
AAGCTTTCTTACATTGAAGATGTGGGCAACGTTGGAATGGCTGAATTTTT
CGATTCACCTCAAAATTTGCAAGAAAAAATTGAACAACTTGCCAAATTAA
TACAGAAGAGCAAGCATCTAGTGGTGTTTACAGGTGCAGGAATCTCAACT
TCTTGTGGTATACCTGATTTTTCGAGGTCCAAATGGAATTTGGACACTGC
AGCGTGAGGGAAAACCCTTACCTGAAGCTTCCCTACCATTTCATCGCGCT
ATGCCAGGCATGACTCACATGGCTTTGGTTGAATTAGAGAAGGCTGGCAT
TTTAAAGTTTGTTATTAGTCAGAATGTTGATGGCCTTCATCTTCGGTCTG
GAATTCCAAGGGAGAAGCTTGCAGAATTGCATGGGAATTCCTTCATGGAG
GCTTGCCCTTCATGTGGAAGCGAGTATTTCCGTGACTTTGAGGTGGAAAC
AATTGGATTAAAAGAGACATCACCGACGTT
back to top