CF509474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.839e-29 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 105 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AA+AFPGFG +G+ T RKREIAAF AQT HETTGGW AP G Y Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPY 143
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 8.667e-28 Identity = 58/92 (63.04%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 126 GERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 G D G D G L II + F+ LL +RNDARCPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF QT HETTGGW DAP G Y Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPY 167
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.478e-27 Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW AP G Y Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPY 153
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.478e-27 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 159 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 G+L IISR F+D+L +RND CPARGFYTYDAFI AA++FPGFG +G+ RK+EIAAFF QT HETTGGW AP G Y Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPY 149
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 2.522e-27 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 3 Query: 156 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW AP G Y Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPY 158
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 9.582e-27 Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 159 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 G+L IIS F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+ RK+E+AAFF QT HETTGGW AP G Y Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPY 164
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.788e-26 Identity = 55/98 (56.12%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 108 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 G G G G G GG + ++S+E+FE LL +RNDA CPARGFYTYDA + AA AFP F +G++ RKRE+AAF QT HETTGGW AP G Y Sbjct: 67 GGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPY 164
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 3.641e-26 Identity = 55/99 (55.56%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 CG G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AA+A+P FGN+G+ RKREIAAF QT HETTGGW AP G Y Sbjct: 58 CGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPY 154
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.211e-26 Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 3 Query: 105 CGSGVVCGERDTGHGTD---GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 CGSG C + G G GG+LG IS MF+ +L +RN+ C + FY+Y+AFI AA++FPGFG SG+ RKREIAAFFAQT HETTGGW AP G Y Sbjct: 57 CGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPY 157
BLAST of CF509474 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.059e-25 Identity = 56/104 (53.85%), Postives = 67/104 (64.42%), Query Frame = 3 Query: 105 CGS-----GVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEY 401 CGS G C + G +L +ISR F+ +L +RND CPA+GFYTYDAFI AA+A+P FGN+G+ RKREIAAF QT HETTGGW AP G Y Sbjct: 50 CGSTTDYCGKDCQSQCGGPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPY 153 The following BLAST results are available for this feature:
BLAST of CF509474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509474 ID=CF509474; Name=CF509474; organism=Citrus sinensis; type=EST; length=402bpback to top |