CF509491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: R13A4_ARATH (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.595e-53 Identity = 99/120 (82.50%), Postives = 104/120 (86.67%), Query Frame = 3 Query: 3 RVVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 RVVVDARHHMLGRLAS+ AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT YEGVP PYDK KRMVIPDALK Sbjct: 11 RVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALK 130
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: R13A2_ARATH (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana GN=RPL13AB PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 2.303e-52 Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = 3 Query: 3 RVVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 RVVVDARHHM GRLAS++AKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT +EGVP PYDK KRMVIPDALK Sbjct: 11 RVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVIPDALK 130
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: R13A1_ARATH (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana GN=RPL13AA PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 2.303e-52 Identity = 96/120 (80.00%), Postives = 104/120 (86.67%), Query Frame = 3 Query: 3 RVVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 RVVVDARHHMLGRLASV+AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT +EGVP PYDK KRMV+PDALK Sbjct: 11 RVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVVPDALK 130
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: RL13A_PICMA (60S ribosomal protein L13a OS=Picea mariana GN=RPL13A PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.493e-51 Identity = 96/119 (80.67%), Postives = 105/119 (88.24%), Query Frame = 3 Query: 6 VVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 VVVDARHHMLGRLAS+LAKELL+GQ+VVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAP++ILWRTIRGMIPHKT +EGVP PYD+ KRMVIPDALK Sbjct: 12 VVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRKKRMVIPDALK 130
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: R13A3_ARATH (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana GN=RPL13AC PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.546e-51 Identity = 96/120 (80.00%), Postives = 102/120 (85.00%), Query Frame = 3 Query: 3 RVVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 RVVVD RHHMLGRLAS AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKT +EG+P PYDK KRMVIPDALK Sbjct: 11 RVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKIKRMVIPDALK 130
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: RL13A_LUPLU (60S ribosomal protein L13a OS=Lupinus luteus GN=RPL13A PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 2.017e-48 Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 3 Query: 3 RVVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 RVVVDARHHMLGRLAS++AKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH AP+KI WRT+RGMIPHKT YEG+P P+DK KR+V+PDALK Sbjct: 11 RVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYLRFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQKRLVVPDALK 129
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: RL13A_CYAPA (60S ribosomal protein L13a OS=Cyanophora paradoxa PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.235e-39 Identity = 79/119 (66.39%), Postives = 89/119 (74.79%), Query Frame = 3 Query: 6 VVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 VVVD R H+LGRLA+ LAKELLNGQ+VV VR EEI ISG L R K+K+ FL+KRMNT P GP HFR+PA+ILWRTIRGMIPHKT +EGVP PYDK KRMVIP AL+ Sbjct: 6 VVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQALR 124
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: RL13A_PONAB (60S ribosomal protein L13a OS=Pongo abelii GN=RPL13A PE=2 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 1.227e-37 Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 3 Query: 6 VVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 +V+D R H+LGRLA+++AK++L G+KVVVVRCE I ISG R K+KY+ FLRKRMNT PS GP HFRAP++I WRT+RGM+PHKT ++G+P PYDK KRMV+P ALK Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: RL13A_PIG (60S ribosomal protein L13a (Fragment) OS=Sus scrofa GN=RPL13A PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 1.227e-37 Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 3 Query: 6 VVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 +V+D R H+LGRLA+++AK++L G+KVVVVRCE I ISG R K+KY+ FLRKRMNT PS GP HFRAP++I WRT+RGM+PHKT ++G+P PYDK KRMV+P ALK Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 121
BLAST of CF509491 vs. ExPASy Swiss-Prot
Match: RL13A_MACFA (60S ribosomal protein L13a OS=Macaca fascicularis GN=RPL13A PE=2 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 1.227e-37 Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 3 Query: 6 VVVDARHHMLGRLASVLAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKTKRMVIPDALK 362 +V+D R H+LGRLA+++AK++L G+KVVVVRCE I ISG R K+KY+ FLRKRMNT PS GP HFRAP++I WRT+RGM+PHKT ++G+P PYDK KRMV+P ALK Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALK 125 The following BLAST results are available for this feature:
BLAST of CF509491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509491 ID=CF509491; Name=CF509491; organism=Citrus sinensis; type=EST; length=362bpback to top |