CF509555

Overview
NameCF509555
Unique NameCF509555
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 272.322 bits (695), Expect = 8.384e-73
Identity = 133/146 (91.10%), Postives = 140/146 (95.89%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS--DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV+LGANKFSERQPIGT+AQ   DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGV+ S +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FYMVMQCLGAICGAGVV
Sbjct:    7 DVRLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVV 152          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 1.868e-72
Identity = 132/150 (88.00%), Postives = 141/150 (94.00%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS------DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV+LGANKFSERQPIGT+AQ       DKDYKEPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYITVLTVMGVSKS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY++MQCLGAICGAGVV
Sbjct:    7 DVRLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVV 156          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 2.439e-72
Identity = 130/147 (88.44%), Postives = 141/147 (95.92%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS---DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV+LGANKFSERQPIGT+AQ    DKDYKEPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYIT+LTVMGVSKS +KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY++MQCLGA+CGAGVV
Sbjct:    7 DVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVV 153          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 3.186e-72
Identity = 130/147 (88.44%), Postives = 142/147 (96.60%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS---DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV+LGAN++SERQPIGT+AQ    DKDYKEPPPAPLFEPGELKSWSFYRAGIAEF+ATFLFLYIT+LTVMGVSKS++KC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA+FY+VMQCLGAICGAGVV
Sbjct:    7 DVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVV 153          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 4.161e-72
Identity = 128/144 (88.89%), Postives = 138/144 (95.83%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DVKLGANKF E QP+GT+AQ+DKDYKEPPPAPLFEPGEL SWSFYRAGIAEFMATFLFLYIT+LTVMG+ +S++ CS+VGIQG+AWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYMVMQCLGAICGAGVV
Sbjct:    8 DVKLGANKFRETQPLGTAAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVV 151          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 6.008e-71
Identity = 128/144 (88.89%), Postives = 137/144 (95.14%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV++GANKF ERQPIGTSAQSDKDYKEPPPAPLFEPGEL SWSF+RAGIAEF+ATFLFLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAV+Y+VMQCLGAICGAGVV
Sbjct:    7 DVRVGANKFPERQPIGTSAQSDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVV 150          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 7.847e-71
Identity = 127/144 (88.19%), Postives = 136/144 (94.44%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV++GANKF ERQPIGTSAQ+DKDYKEPPPAP FEPGEL SWSFYRAGIAEF+ATFLFLYITVLTVMGV ++   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFY+VMQCLGAICGAGVV
Sbjct:    7 DVRVGANKFPERQPIGTSAQTDKDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVV 150          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 1.338e-70
Identity = 129/145 (88.97%), Postives = 137/145 (94.48%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQS-DKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV++GANKF ERQPIGTSAQS DKDYKEPPPAPLFEPGEL SWSFYRAGIAEF+ATFLFLYITVLTVMGV ++   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRAVFYM+MQCLGAICGAGVV
Sbjct:    7 DVRVGANKFPERQPIGTSAQSTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVV 151          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 2.982e-70
Identity = 126/144 (87.50%), Postives = 136/144 (94.44%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV++GANKF ERQPIGTSAQSDKDYKEPPPAP FEPGEL SWSF+RAGIAEF+ATFLFLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA++Y+VMQCLGAICGAGVV
Sbjct:    7 DVRVGANKFPERQPIGTSAQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVV 150          
BLAST of CF509555 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 2.982e-70
Identity = 126/144 (87.50%), Postives = 136/144 (94.44%), Query Frame = 1
Query:   64 DVKLGANKFSERQPIGTSAQSDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 495
            DV++GANKF ERQPIGTSAQSDKDYKEPPPAP FEPGEL SWSF+RAGIAEF+ATFLFLYITVLTVMGV +S   C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGL LARKLSLTRA++Y+VMQCLGAICGAGVV
Sbjct:    7 DVRVGANKFPERQPIGTSAQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVV 150          
The following BLAST results are available for this feature:
BLAST of CF509555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PIP12_ORYSJ8.384e-7391.10Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP13_MAIZE1.868e-7288.00Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_MAIZE2.439e-7288.44Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP11_ORYSJ3.186e-7288.44Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP1_SOLLC4.161e-7288.89Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP12_ARATH6.008e-7188.89Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP13_ARATH7.847e-7188.19Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP14_ARATH1.338e-7088.97Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP11_VICFA2.982e-7087.50Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.982e-7087.50Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-063 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509555 ID=CF509555; Name=CF509555; organism=Citrus sinensis; type=EST; length=495bp
TTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATCGTCAATGGA
AGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGAGGC
AACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGAGCCACCA
CCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAG
AGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTACATCACTG
TCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTC
GGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCCCTTGT
TTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCAGTGACCT
TCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCTGTCTTCTAC
ATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGTTGTC
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