CF509570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 4.179e-97 Identity = 159/173 (91.91%), Postives = 167/173 (96.53%), Query Frame = 1 Query: 1 AADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 519 AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGL SDPE+LRWN Q+E+VHCRWAMLGAAGIFIPELLTK+GILNTPSWYTAGE EYFTDTTTLFIVE++ IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLA Sbjct: 60 AADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLA 232
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 2.074e-96 Identity = 155/173 (89.60%), Postives = 167/173 (96.53%), Query Frame = 1 Query: 1 AADPNRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 519 AADP+RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPE+L+WN Q+E+VH RWAMLGAAGIFIPE LTK+G+LNTPSWYTAGE EYFTDTTTLF++E++ IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLA Sbjct: 60 AADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLA 232
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.037e-47 Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 1 Query: 25 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 519 W PG P +L GSLPGD GFDPLGL DPE LRW VQ+E+V+ RWAMLG AG+ +PE+ T +GI+N P WY AG+ EYF ++TLF++E I + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + E + KEI NGRLAMLA Sbjct: 56 WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAMLA 214
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.154e-46 Identity = 88/165 (53.33%), Postives = 113/165 (68.48%), Query Frame = 1 Query: 25 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 519 W PG P++L GSL GD GFDPLGL DPE L+W VQ+E+V+ RWAMLG AG+ +PE+ TK+GI+N P WY AG+ +YF ++TLF++E I + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + +E + KE+ NGRLAMLA Sbjct: 57 WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLA 215
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.721e-37 Identity = 85/166 (51.20%), Postives = 106/166 (63.86%), Query Frame = 1 Query: 25 WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWY-TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 519 W PG P +LDGSL GD GFDPL L DPE LRW VQ+++V+ RWAMLG AG+ IPE+LTK G++N P W G+ YF ++T V M + E RRW DI PG VN DPIF + L + GYPG + F+PL + +P + KE KE+ NGRLAMLA Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRV-FNPLNF---APLENKE---KELANGRLAMLA 193
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.463e-33 Identity = 85/186 (45.70%), Postives = 108/186 (58.06%), Query Frame = 1 Query: 13 NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG--TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 519 NR LWF +LDG LPGDFGFDPLGL SDPE +W E+++ R+AMLGAAG PE+L K G++ +W+ AG Y+ D TLF++EM +G+AE RR+ D KPG + K G D YPGG F+PLG+G + +KEL+ KEIKNGRLAMLA Sbjct: 52 NRQLWFASKQSLSYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGK-DEKSMKELKLKEIKNGRLAMLA 235
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.911e-33 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 13 NRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPETL------RWNVQSEIVHCRWAMLGAAGIFIPELLTKLGIL---NTPSWY------TAGELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTG--TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLA 519 +RPLWF +LDGSLPGD+GFDPLGL SDPE RW E+++ R+AMLGA G PE L K+G++ +W+ AG Y+ D TLF++EM +G+AE RR+ D KPG + K G + YPGG +F+PLG+G + +KEL+ KE+KNGRLAMLA Sbjct: 54 DRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGK-DEKSLKELKLKEVKNGRLAMLA 237
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.851e-28 Identity = 71/176 (40.34%), Postives = 98/176 (55.68%), Query Frame = 1 Query: 46 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP------NNKLTGTDVGYPGGLWFDPL--------GWGSGSPEKVKELRTKEIKNGRLAMLA 519 PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAML GIF+ + T + W+ A G + F+ TL +++ +GW E +RW D P + + P N + + GYPGG +FDPL G + +K++ L+ EIK+ RLAMLA Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI------PWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLA 241
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 7.033e-28 Identity = 72/177 (40.68%), Postives = 98/177 (55.37%), Query Frame = 1 Query: 46 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNK-------LTGTDVGYPGGLWFDPL--------GWGSGSPEKVKELRTKEIKNGRLAMLA 519 PEWLDGSLPGD+GFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ A G + F+ TL ++I +GW E +RW D P + + P +K TG + GYPGG +FDPL G EK++ L+ EIK+ RLAMLA Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFS-FGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTG-EQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLA 236
BLAST of CF509570 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.016e-26 Identity = 71/177 (40.11%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 46 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTA----GELEYFTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNK-------LTGTDVGYPGGLWFDPL--------GWGSGSPEKVKELRTKEIKNGRLAMLA 519 PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAM GIF+ + + + W+ A G + F+ +L +++ +GW E +RW D + D P +K TG + GYPGG +FDPL G EK++ L+ EIK+ RLAMLA Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFS-FGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTG-EQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLA 236 The following BLAST results are available for this feature:
BLAST of CF509570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509570 ID=CF509570; Name=CF509570; organism=Citrus sinensis; type=EST; length=519bpback to top |