CF509574
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: AIG1_ARATH (Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.194e-26 Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 3 Query: 75 DDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 D++ + P E +VLVGRTGNGKSATGNSI+ + FKS+ SSGVT C + V +G ++NVIDTPGLFD S +EF+GKEIVKC+ +A G+HAVL+ Sbjct: 32 DEFSASQPHPVEN-IVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEGPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLL 132
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: P2A03_ARATH (Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.331e-23 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 111 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 + +VLVGRTGNGKS+TGN++LG + FKS+ + GVT CEM R ++DG ++NVIDTPGL D + + EI+ C+ MA++GIHAVL+ Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLL 95
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA4_HUMAN (GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.091e-17 Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 96 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 P N + +VLVG+TG GKSATGNSILGR+ F S ++ +T CE + + K+ ++V V+DTPG+FD + KEI++CI + G HA+L+ Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLL 119
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA4_RAT (GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.881e-15 Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 3 Query: 117 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 +VL+G+TG GKS+TGNSILGR+AF S + +T CE + + DG+ + V+DTPG+FD KEI +C+ + G HA+L+ Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCE-KGVSIWDGKELVVVDTPGIFDTEVPDADTQKEITRCVALTSPGPHALLL 119
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA5_HUMAN (GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.130e-13 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 39 GTFYMMGGSAIDDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 G + M +D+ T P+ ++LVG+TG GKSATGNSILG+ F+S+ + VT TC++ +T +G+ V V+DTP +F+ A ++ + K I C ++ G H +L+ Sbjct: 7 GKYGTMAEGRSEDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTWNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLL 116
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA4_MOUSE (GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.633e-13 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 117 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 +VL+G+TG GKS+TGNSILG + F S + +T CE +R DG+ + V+DTPG+FD +EI + + + G HA+L+ Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFDTEVPDADTQREITRYVALTSPGPHALLL 119
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA7_HUMAN (GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.057e-12 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 117 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 +VLVG+TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD + KEI +CI + G HA+++ Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVL 97
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA2_HUMAN (GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.803e-12 Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 99 SNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 S E ++LVG+TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +IDTP +F + E + KE+ +C ++ G H +L+ Sbjct: 19 SRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLL 111
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA6_MOUSE (GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.246e-12 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 117 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 ++LVG+TG+GKSATGNSILGR+AF+S+ S+ VT+T + + T +G+ + VIDTP +F E K+I C +A G HAVL+ Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFSPQNQPEATAKKI--CDLLASPGPHAVLL 190
BLAST of CF509574 vs. ExPASy Swiss-Prot
Match: GIMA8_HUMAN (GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.948e-12 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 108 ERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLV 380 E ++L+G+ +GKSATGN+ILG+ FKS+ S V C+ + VL++ +VV VIDTP LF A +E + I C+ ++ +HA+L+ Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPDLFSSIACAEDKQRNIQHCLELSAPSLHALLL 99 The following BLAST results are available for this feature:
BLAST of CF509574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509574 ID=CF509574; Name=CF509574; organism=Citrus sinensis; type=EST; length=380bpback to top |