CF509634

Overview
NameCF509634
Unique NameCF509634
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: U533_DICDI (UPF0533 protein OS=Dictyostelium discoideum GN=DDB_G0269062 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 6.867e-30
Identity = 64/152 (42.11%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  186 DSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            + +G++ +L L    G IYLGE FC YIS+NN S  +VR+V +K E+QT   RI LLD+ +  V +   G   DF+V+ +VKE G + LVC   Y+  EGE+K   ++FKF V NPL ++T++  +  + FLEAC+ N T+ +L+++ + FE
Sbjct:   73 EGLGVTSMLQLQS--GVIYLGEMFCCYISLNNHSPYQVRNVFLKVELQTTSSRIPLLDSEQQSVPTFNPGFSSDFVVQREVKESGVNILVCAVNYTTPEGEQKKFRKYFKFQVLNPLVLKTRIHNLPNVVFLEACLENATQGSLFIESILFE 222          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_DANRE (UPF0533 protein C5orf44 homolog OS=Danio rerio GN=zgc:73187 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.768e-28
Identity = 68/154 (44.16%), Postives = 97/154 (62.99%), Query Frame = 3
Query:  183 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++KA++QT  QR L L  S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK      +  FLEA I N T S ++M++V  E
Sbjct:   56 AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVKADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLYFRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLE 208          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_XENTR (UPF0533 protein C5orf44 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.394e-28
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 3
Query:  183 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            A+++ L  +L LPQ FG I+LGETF SYIS++N S   V+D+ +KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK      +  FLEA I N T S ++M++V  E
Sbjct:   56 AETLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDIQVKADLQTSSQR-LNLSASTAVVSELKPDSCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLE 208          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_PONAB (UPF0533 protein C5orf44 homolog OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.096e-27
Identity = 68/162 (41.98%), Postives = 98/162 (60.49%), Query Frame = 3
Query:  177 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I N T S ++M++V  E
Sbjct:   54 NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLE 214          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_HUMAN (UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.096e-27
Identity = 68/162 (41.98%), Postives = 98/162 (60.49%), Query Frame = 3
Query:  177 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I N T S ++M++V  E
Sbjct:   54 NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLE 214          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_BOVIN (UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.096e-27
Identity = 68/162 (41.98%), Postives = 98/162 (60.49%), Query Frame = 3
Query:  177 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I N T S ++M++V  E
Sbjct:   54 NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLE 214          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_XENLA (UPF0533 protein C5orf44 homolog OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.870e-27
Identity = 68/154 (44.16%), Postives = 94/154 (61.04%), Query Frame = 3
Query:  183 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+DV +KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK      +  FLEA I N T S ++M++V  E
Sbjct:   56 AEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDVQVKADLQTSSQR-LNLSASSAVVADLKPDSCIDDVIHHEVKEIGTHILVCAVSYTIQSGEKMYFRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLE 208          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_RAT (UPF0533 protein C5orf44 homolog OS=Rattus norvegicus PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.870e-27
Identity = 68/162 (41.98%), Postives = 98/162 (60.49%), Query Frame = 3
Query:  177 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I N T S ++M++V  E
Sbjct:   54 NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLE 214          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: CE044_MOUSE (UPF0533 protein C5orf44 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.870e-27
Identity = 68/162 (41.98%), Postives = 98/162 (60.49%), Query Frame = 3
Query:  177 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V+TK       +  V +  FLEA I N T S ++M++V  E
Sbjct:   54 NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLE 214          
BLAST of CF509634 vs. ExPASy Swiss-Prot
Match: U533_DROME (UPF0533 protein CG4953 OS=Drosophila melanogaster GN=CG4953 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24
Identity = 75/187 (40.11%), Postives = 109/187 (58.29%), Query Frame = 3
Query:  123 VTTNKSSDLTYRSRFLLHDSADSIGLSG----------LLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL--DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKV--RVVKEITFLEACI*NHTKSNLYMDQVEFE 641
            V T + +DL  R       S +S G+SG          +L+LPQ+FG+IYLGETF SYI ++N++   V  V +KA++Q++  RI L   + +KSPV  +  GG  D ++ ++VKE+G H LVC   YS   G  + L +FFKF V  PL V+TK     + EI +LEA I N T S   +++VE +
Sbjct:   29 VVTCEPTDLVQR----FSSSQESDGMSGACAETLAAGQVLLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVKADLQSNTSRINLSMHENAKSPV-VLPPGGTIDDVIRYEVKEIGTHILVCEVNYSTPAGYAQSLRKFFKFQVLKPLDVKTKFYNAEIDEI-YLEAQIQNVTTSPFCLEKVELD 209          
The following BLAST results are available for this feature:
BLAST of CF509634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
U533_DICDI6.867e-3042.11UPF0533 protein OS=Dictyostelium discoideum GN=DDB... [more]
CE044_DANRE3.768e-2844.16UPF0533 protein C5orf44 homolog OS=Danio rerio GN=... [more]
CE044_XENTR8.394e-2843.51UPF0533 protein C5orf44 homolog OS=Xenopus tropica... [more]
CE044_PONAB1.096e-2741.98UPF0533 protein C5orf44 homolog OS=Pongo abelii PE... [more]
CE044_HUMAN1.096e-2741.98UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44... [more]
CE044_BOVIN1.096e-2741.98UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2... [more]
CE044_XENLA1.870e-2744.16UPF0533 protein C5orf44 homolog OS=Xenopus laevis ... [more]
CE044_RAT1.870e-2741.98UPF0533 protein C5orf44 homolog OS=Rattus norvegic... [more]
CE044_MOUSE1.870e-2741.98UPF0533 protein C5orf44 homolog OS=Mus musculus PE... [more]
U533_DROME5.630e-2440.11UPF0533 protein CG4953 OS=Drosophila melanogaster ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-142 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509634 ID=CF509634; Name=CF509634; organism=Citrus sinensis; type=EST; length=641bp
GTAGGCCGTCGTTACACGTGGAGCCTCCTCTTCGCGTAGACCCCACCGAT
CTCTTCATCGGCGAGGACATCTTCGACGATCCAATCGCCGCTTCCAACCT
CCCTCCACTAATATCTAGCGACGTCACCACCAACAAATCCTCCGATCTCA
CCTATCGCTCTAGATTCCTCCTCCACGACTCCGCTGATTCCATCGGCCTC
TCCGGCCTCCTCGTCCTCCCCCAAGCCTTCGGGGCTATTTATCTGGGAGA
GACGTTTTGTAGCTACATTAGTATCAACAACAGTTCCACTTTAGAAGTTA
GAGATGTTGTTATTAAGGCAGAAATTCAAACGGATAAGCAGAGGATCCTC
CTTTTGGATACGTCAAAATCACCTGTTGAATCAATACGAGCGGGCGGACG
TTATGATTTCATCGTAGAACATGATGTCAAAGAACTCGGAGCTCATACGC
TTGTGTGCACGGCATTGTATAGTGATGGTGAGGGAGAGCGGAAATATCTT
CCACAGTTTTTCAAGTTCATTGTCTCCAATCCACTTTCAGTTCGGACCAA
GGTCCGTGTTGTTAAGGAAATAACATTTTTAGAGGCATGCATTTAGAATC
ATACCAAATCAAACCTTTATATGGACCAAGTTGAGTTTGAG
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